sixarm_ruby_metric_names • Science 44%

SixArm.com » Ruby » Metric names for numbers including kilo, mega, giga, terra, etc.

peka-eclip • Science 44%

Download and prepare ENCODE eCLIP raw fastq for processing with the nf-core/clipseq pipeline

cft-analysis • Science 54%

Python package for the analysis of data collected during the Cold Face Test (CFT) study.

https://github.com/bioarchlinux/calamares-config • Science 13%

Calamares configure files

sixarm_ruby_pathname_dirnames • Science 44%

SixArm.com » Ruby » Pathname#dirnames method to iterate on parent directories

https://github.com/bioarchlinux/artwork • Science 13%

Artwork for BioArchLinux

sixarm_ruby_range_parse • Science 44%

SixArm.com » Ruby » Range.parse method to convert text to a Range object.

https://github.com/bioarchlinux/iso • Science 13%

BioArchLinux in ISO

sixarm_ruby_to_id • Science 44%

SixArm.com » Ruby » Convert from an object to an id, uuid, etc.

sixarm_vim_vimrc_dot_files • Science 44%

SixArm » Vim » vimrc dot files for configuration

stir • Science 85%

Software for Tomographic Image Reconstruction

https://github.com/bioatmosphere/gog • Science 26%

A GoG framework of predictive syntheses of pattern, diversity, and process of vegetation and microbiome

https://github.com/bioatmosphere/hybioml • Science 13%

Hybrid Biosphere ModeL

2024-05-30-stonybrook • Science 31%

https://github.com/avallecam/instagramr • Science 13%

https://github.com/bioatmosphere/nm-ghgs • Science 13%

Significance of non-microbial processes in organic matter decompositon in ecosystems across scales

ssid-powerful • Science 44%

ssid-powerful command that looks up an ssid in a data file of known-good entries

ros2_nist_training • Science 18%

ROS 2 training

ifcmerge • Science 44%

A three-way-merge tool for IFC files

kvfinder-web-portal • Science 44%

KVFinder-web portal: a Shiny App for interacting with KVFinder-web service

minimaxApprox • Science 57%

Implementation of Remez Algorithm for Polynomial and Rational Function Approximation.

https://github.com/biocommons/python-package • Science 26%

Template for new biocommons packages, and source of configuration for periodic updates to derived packages

ravenleetcodesolutions • Science 44%

My Solutions for Leetcode Problems, for studying.

sixarm_ruby_array_slice • Science 44%

SixArm.com SixArm.com » Ruby » Array slice methods: #slice_by_size and #sllice_by_share

https://github.com/biocommons/seqrepo-rest-service • Science 26%

OpenAPI-based REST interface to biological sequences and sequence metadata

2021-06-23-ttt-online-edt • Science 18%

2025-03-26-cdu-online • Science 31%

Carpentries Workshop at Charles R. Drew University of Medicine and Science, Los Angeles on 26th and 27th Mar 2025

southwardnivalis • Science 44%

Repository of scripts and supplimentary files for the paper Harnessing Historical Sampling to Substantiate Range Shifts: Southward Movement of North American Least Weasels (Mustela nivalis)

technotes • Science 44%

Technical notes that we maintain for our projects

https://github.com/bioconductor/s7examples • Science 13%

hdrm • Science 44%

R package providing a one sample test for high dimensional repeated measures for one or multiple groups

https://github.com/bioconductor/s4examples • Science 26%

butterfly • Science 26%

Verification of continually updating timeseries data where we expect new values, but want to ensure previous data remains unchanged. Maintained by @thomaszwagerman

tabelle-fallstudie-3 • Science 67%

https://github.com/bioconductor/releaselaunch • Science 26%

documentation and R scripts helpful for Bioconductor release

cavity-quantum-criticality • Science 67%

This repository contains the code and data to produce the data figures of arXiv:2302.08528.

https://github.com/bioconductor/eurobioc2023 • Science 13%

lm-evaluation-harness-goose • Science 77%

A framework for few-shot evaluation of language models.

https://github.com/bioconductor/annotationhubdata • Science 26%

Transform public data resources into Bioconductor Data Structures

spotify-api-data-modelling-project • Science 31%

dc-genomics-workshop-testout • Science 44%

https://github.com/bioconductor/loomexperiment • Science 26%

A package to read, write, and manipulate loom files using LoomExperiments. Uses the loom file format from the Linnarson Lab. https://linnarssonlab.org/loompy/

https://github.com/bioconductor/soundboard • Science 13%

Statistically-informed Multi-Omics Reports for Tumor and Other Boards

fairshare • Science 77%

Simplifying the curation and sharing of biomedical research data and software according to applicable FAIR guidelines

collection_builder_tesst • Science 44%

Testing the Github version of Collection Builder by https://collectionbuilder.github.io/about.html#people

https://github.com/bioconductor/bioc2023 • Science 13%

https://github.com/clinical-infection-research-uosheffield/development_natural_protective_immunity_streptococcus_pyogenes • Science 39%

vinos • Science 67%

https://github.com/bioconductor/biocasia2024 • Science 26%

earthquake_detection • Science 67%

https://github.com/bioconductor/annotationforge • Science 26%

Tools for building SQLite-based annotation data packages

global-chem • Science 57%

A Knowledge Graph of Common Chemical Names to their Molecular Definition

https://github.com/bioconductor/chipseq • Science 26%

chipseq: A package for analyzing chipseq data

https://github.com/bioconductor/xvector • Science 26%

Foundation of external vector representation and manipulation in Bioconductor

fourplebsapi • Science 67%

R implementation for the 4plebs.org API

discursis • Science 26%

Demo notebooks for ATAP tools

workbench-sydney-speaks • Science 39%

Workbench for corpus tools accessing the Sydney Speaks corpus

rocrate-test-2 • Science 39%

https://github.com/bioconductor/dyndoc • Science 13%

Dynamic document tools

romantic_piano_corpus • Science 57%

arosics • Science 54%

AROSICS - Automated and Robust Open-Source Image Co-Registration Software

https://github.com/bioconductor/pwalign • Science 26%

Perform pairwise sequence alignments

https://github.com/bioconductor/updateobject • Science 13%

Find/fix old serialized S4 instances

https://github.com/clinical-infection-research-uosheffield/nf-core-seqcoverage • Science 13%

Pipeline generating coverage graphs by aligning sequencing reads to a selected viral reference genome, visualizing the depth of coverage across the genome.

trove-research • Science 39%

web-archives • Science 39%

https://github.com/bioconductor/biocworkshopsubmit • Science 13%

mip-dmp • Science 49%

Python tool with Graphical User Interface to map datasets to a specific Common Data Elements (CDEs) metadata schema of a federation of the Medical Informatics Platform (MIP).

https://github.com/bioconductor/orchestratingsinglecellanalysis-devel • Science 13%

Compiled output of the OSCA book on BioC-devel

https://github.com/clinical-infection-research-uosheffield/floreytemplate • Science 13%

ibex_imaging_knowledge_base • Science 26%

https://github.com/bioconductor/bioconductor.org_archive • Science 13%

https://github.com/bioconductor/ensembl.utils • Science 13%

Low-level utilities to retrieve data from Ensembl

conjugate-map • Science 67%

Files and scripts relating to geomagnetic conjugate maps.

https://github.com/bioconductor/meetups • Science 13%

Bioconductor repository for meetup groups

https://github.com/bioconductor/biocgpu • Science 13%

Usage of Bioconductor packages on GPUs, available docker images for bioconductor-ml

https://github.com/bioconductor/eurobioc2020 • Science 13%

European Bioconductor Conference, December, 2020

slis-5030-assignment • Science 26%

rica • Science 54%

Rica (Reports for ICA) provides an app to visualize ICA components and perform manual classification in an interactive way

https://github.com/bioconductor/bioc2020 • Science 13%

BioC2020: Where Software and Biology Connect

https://github.com/bioconductor/gha-build-jupyter-release-amd64 • Science 13%

https://github.com/bioconductor/helm-charts • Science 13%

Packaged helm charts for Kubernetes stack

ediciones • Science 54%

Collection of historical texts about Humboldt's trip to Cuba and the reception of his work encoded with TEI as part of Proyecto Humboldt Digital

cubed • Science 57%

CUrvature-Based Eulerian statistics Decomposition

https://github.com/bioconductor/biocworkshops2019 • Science 13%

The official repository of the Bioconductor 2019 Conference Workshops :confetti_ball:

https://github.com/bioconductor/bioc2019 • Science 13%

BioC2019: Where Software and Biology Connect

fmriprep-phases • Science 49%

A fork of fmriprep-1.2.6 that handles UPenn B0map fieldmaps

citationstylelanguage • Science 13%

citationStyleLanguage + MARC omp 4

se4ml • Science 49%

Software Engineering for Machine Learning

https://github.com/bioconductor/uniquegeneric • Science 13%

A minimalist R package that only defines a unique() S4 generic.

https://github.com/bioconductor/testthis • Science 13%

This is a package for using standardized testing frameworks in Bioconductor

https://github.com/bioconductor/spbtest4 • Science 13%

test package for single package builder

emotions_recognition_using_speech • Science 54%

https://github.com/bioconductor/docker.workshop • Science 13%

Materials for Docker workshop at BioC2015 conference

https://github.com/bioconductor/servicemonitoring • Science 13%

Service monitoring resources

appian • Science 49%

APPIAN is an open-source automated software pipeline for analyzing PET images in conjunction with MRI. The goal of APPIAN is to make PET tracer kinetic data analysis easy for users with moderate computing skills and to facilitate reproducible research.

https://github.com/bioconductor/intermediater • Science 13%

Intermediate R course offered to members of RPCI / SUNY at Buffalo

https://github.com/bioconductor/salmon_quant • Science 13%

Quantify RNA-seq data using Salmon

https://github.com/bioconductor/coursehelper • Science 13%

rails app for managing EC2 instances used in Bioconductor courses

https://github.com/bioconductor/issue_tracker_github_cookbook • Science 13%