ctl • Rank 12.8 • Science 13%

Control your environment.

excel.link • Rank 12.8 • Science 13%

Convenient Data Exchange between R and Microsoft Excel

drawProteins • Rank 15.8 • Science 10%

Creating package to draw proteins from Uniprot API

inspyred • Rank 15.8 • Science 10%

Python library for bio-inspired computational intelligence

response • Rank 12.8 • Science 13%

Your handy frequency and impulse response processing object

diveMove • Rank 12.8 • Science 13%

diveMove is a GNU R package with tools to represent, visualize, filter, analyse, and summarize time-depth recorder (TDR) data. It also provides miscellaneous functions for handling location data.

RSNNS • Rank 15.8 • Science 10%

RSNNS: Neural Networks in R using the Stuttgart Neural Network Simulator (SNNS)

EffectLiteR • Rank 12.8 • Science 13%

R package for analyzing average and conditional effects

mermaid • Rank 15.8 • Science 10%

Image registration using pytorch

ace • Rank 12.8 • Science 13%

Python package for performing the Alternating Conditional Expectation (ACE) regression

GeneExpressionSignature • Rank 12.8 • Science 13%

Gene Expression Signature based Similarity Metric

https://github.com/alan-turing-institute/hut23-compiler-club • Rank 2.8 • Science 23%

Informal club to learn about computer fundamentals

https://github.com/aces/surface-extraction • Rank 2.8 • Science 23%

Surface extraction code for CIVET

https://github.com/cboettig/earlywarning • Rank 2.8 • Science 23%

:notebook: Methods for detecting early warning signals of critical transitions

https://github.com/complexdatacollective/secure-comms-api • Rank 2.8 • Science 23%

https://github.com/google-deepmind/cube • Rank 2.8 • Science 23%

Code for CUBE extraction and cultural diversity metric introduced in "Beyond Aesthetics: Cultural Competence in Text-to-Image Models"

https://github.com/complexdatacollective/protocol-validation • Rank 2.8 • Science 23%

Submodule implementing protocol schema validation

https://github.com/broadinstitute/gtex-tutorials • Rank 2.8 • Science 23%

gtfspy • Rank 12.8 • Science 13%

Public transport network analysis using Python 🚊🚇🚃🚌🛳️🚡🚠🚞

https://github.com/arkworks-rs/sponge • Rank 15.8 • Science 10%

This library is archived; see crypto-primities for the latest version of this code

facet • Rank 12.8 • Science 13%

Service manager for asyncio

https://github.com/citiususc/hipster • Rank 12.7 • Science 13%

Hipster4j is a lightweight and powerful heuristic search library for Java and Android. It contains common, fully customizable algorithms such as Dijkstra, A* (A-Star), DFS, BFS, Bellman-Ford and more.

https://github.com/cytoscape/cytoscape-jupyter-widget • Rank 5.7 • Science 20%

Cytoscape.js based network visualizer for Jupyter Notebook

prompt • Rank 12.7 • Science 13%

Dynamic R prompt

wsrf • Rank 12.7 • Science 13%

wsrf: Weighted Subspace Random Forest for Classification

APAlyzer • Rank 12.7 • Science 13%

APAlyzer is a toolkit for bioinformatic analysis of alternative polyadenylation (APA) events using RNA sequencing data. Our main approach is the comparison of sequencing reads in regions demarcated by high-quality polyadenylation sites (PASs) annotated in the PolyA_DB database (https://exon.apps.wistar.org/PolyA_DB/v3/). The current version (v3.0) uses RNA-seq data to examine APA events in 3’ untranslated regions (3’UTRs) and in introns. The coding regions are used for gene expression calculation.

https://github.com/csinva/gpt-paper-title-generator • Rank 5.7 • Science 20%

Generating paper titles (and more!) with GPT trained on data scraped from arXiv.

elexonpy • Rank 12.7 • Science 13%

Python package wrapper around Elexon api

ogc • Rank 12.7 • Science 13%

🦔 OGC

RcppQuantuccia • Rank 12.7 • Science 13%

R Bindings for QuantLib Calendering

https://github.com/ajacquey/golem-examples • Rank 2.7 • Science 23%

Input files for running simulations presented in Cacace & Jacquey (2017), Solid Earth

https://github.com/aehrc/vector-integration-simulation-pipeline • Rank 2.7 • Science 23%

A pipeline for simulating viral or vector integration into a host genome

https://github.com/ami-iit/mapest • Rank 2.7 • Science 23%

Maximum A Posteriori estimation for human kinematics and dynamics.

https://github.com/chendaniely/dirty • Rank 2.7 • Science 23%

Dirties data in R

https://github.com/complexdatacollective/networkquery • Rank 2.7 • Science 23%

utility for querying against a network

https://github.com/alan-turing-institute/t-reg-hmi • Rank 2.7 • Science 23%

https://github.com/avik-pal/reviewing-a-pull-request • Rank 2.7 • Science 23%

https://github.com/andreww/prem4derg • Rank 2.7 • Science 23%

Implementation of PREM in Python for the Deep Earth Research Group in Leeds

https://github.com/crsh/ant • Rank 2.7 • Science 23%

Implementation of the Attentional Network Test in OpenSesame

https://github.com/crsh/combitva • Rank 2.7 • Science 23%

Implementation of CombiTVA paradigm in OpenSesame

ddmfaultslip.jl • Rank 2.7 • Science 23%

https://github.com/banesullivan/server-thread • Rank 12.7 • Science 13%

⚙️ Launch a WSGI or ASGI Application in a background thread with werkzeug or uvicorn

seer • Rank 15.7 • Science 10%

:chart_with_upwards_trend: Feature-based Forecast Model Selection (FFORMS) :clock1: :clock130: :clock10: :clock1030: :clock11: :clock1130: :clock12: :clock1230: :clock2: :clock230: :clock3: :clock330: :clock4: :clock430: :clock5: :clock530: :clock6: :clock630: :clock7: :clock730: :clock8: :clock830: :clock9: :clock930:

read.dbc • Rank 12.7 • Science 13%

An R package for reading data in the DBC (compressed DBF) format used by DATASUS.

DSI • Rank 12.7 • Science 13%

The DataSHIELD Interface. Virtual classes to be implemented for accessing data repositories and base functions to be used by DS clients.

mutalyzer • Rank 12.7 • Science 13%

Tool suite for HGVS variant descriptions

trinity • Rank 15.7 • Science 10%

The Trinity client for the Ethereum network

https://github.com/awslabs/fhir-works-on-aws-interface • Rank 15.7 • Science 10%

The interface for the FHIR Works on AWS framework. This package is the glue that allows communication to flow between components

https://github.com/autodistill/autodistill-grounded-sam • Rank 12.7 • Science 13%

GroundedSAM Base Model plugin for Autodistill

clustercons • Rank 5.6 • Science 20%

Merged consensus clustering to assess and improve class discovery with microarray data

aroma.light • Rank 15.6 • Science 10%

🔬 R package: This is the Bioconductor devel version of the aroma.light package.

deductive • Rank 12.6 • Science 13%

Methods for deductive data correction and imputation

pydelica • Rank 7.6 • Science 18%

OpenModelica for Python using parsing of XML for parameter setup

https://github.com/byt3n33dl3/crackavfee • Rank 2.6 • Science 23%

it's a CVE-2022-3368 (Patched), but feel free to use it for check any outdated software or reseach

https://github.com/chakravala/similitude.jl • Rank 2.6 • Science 23%

Dimensions and Quantities for UnitSystems.jl

covid-19_piedmont • Rank 2.6 • Science 23%

COVID-19 Surveillance Data Modelling and Management Pipeline in Piedmont.

https://github.com/aiidateam/aiida_docker_compose • Rank 2.6 • Science 23%

Some examples of docker-compose configurations to start automatically AiiDA and all related services.

https://github.com/cbg-ethz/scsommerclock • Rank 2.6 • Science 23%

Test for a molecular clock based on the phylogenetic tree inferred from single-cell DNA sequenzing data

https://github.com/azavea/keystone-crossroads-education-berlin • Rank 2.6 • Science 23%

https://github.com/cytoscape/cytoscape-app-template • Rank 2.6 • Science 23%

Cytoscape 3 project files for App developers.

https://github.com/cytoscape/cytoscape-support • Rank 2.6 • Science 23%

Cytoscape 3 support bundles.

moody • Rank 2.6 • Science 23%

CLI for the Mars ODE PDS Node

https://github.com/becksteinlab/vesicle_library • Rank 2.6 • Science 23%

library of vesicles with the Dry Martini force field

cmappy • Rank 15.6 • Science 10%

Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools

untb • Rank 12.6 • Science 13%

Hubbell's unified neutral theory of biodiversity

scTenifoldKnk • Rank 15.6 • Science 10%

R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.

static • Rank 15.6 • Science 10%

A very simple WSGI way to serve static and dynamic content.

pareto • Rank 15.6 • Science 10%

Nondominated sorting for multi-objective problems

regionReport • Rank 15.6 • Science 10%

Generate HTML report for a set of genomic regions or DESeq2/edgeR results

spsurvey • Rank 12.6 • Science 13%

spsurvey: Spatial Sampling Design and Analysis in R

https://github.com/arnauqb/qwind • Rank 5.6 • Science 20%

A non-hydrodynamical model for AGN line-drive winds.

https://github.com/brightway-lca/matrix_utils • Rank 12.6 • Science 13%

Utilities to build and iterate on matrices using datapackages

https://github.com/aryashah2k/aryagpt • Rank 2.6 • Science 23%

Webapp to answer questions about my resume leveraging Langchain, OpenAI, Streamlit

python-altmetric • Rank 2.6 • Science 23%

Altmetric API v1 wrapper for Python

diffpriv • Rank 15.6 • Science 10%

Easy differential privacy in R

dendsort • Rank 12.6 • Science 13%

dendsort: Modular Leaf Ordering Methods for Dendrogram Nodes

seqgendiff • Rank 12.6 • Science 13%

Sequence Generation for Differential Expression Analysis and Beyond

noctua • Rank 12.6 • Science 13%

Connect R to Athena using paws SDK (DBI Interface)

https://github.com/crowdstrike/crimson-falcon • Rank 12.6 • Science 13%

A Shiny Ruby SDK of our Falcon API

https://github.com/cog-imperial/romodel • Rank 5.6 • Science 20%

Modeling robust optimization problems in Pyomo

rBiopaxParser • Rank 15.6 • Science 10%

Parses BioPAX files (BioPAX Version 2 and BioPAX Version 3 are supported) and represents them in R. There is quite alot of documentation available for this package. See the reference manual and the vignette for examples! If you have any questions or suggestions... DONT BE SHY! Mail me! See package description for an email address.

cobalt • Rank 12.5 • Science 13%

A lightweight python library for working with Akoma Ntoso documents.

classifier • Rank 15.5 • Science 10%

Organize files in your directory instantly, by classifying them into different folders

https://github.com/coastalwhite/wavedrom-rs • Rank 12.5 • Science 13%

Beautiful Digital Timing Diagrams with Rust

nmproject • Rank 12.5 • Science 13%

Turning R and RStudio into a NONMEM model development environment

https://github.com/activitywatch/aw-client-js • Rank 12.5 • Science 13%

Client library for ActivityWatch in JavaScript

FSelector • Rank 15.5 • Science 10%

FSelector R package

mipfp • Rank 15.5 • Science 10%

Multidimensional Iterative Proportional Fitting and Alternative Models

seg • Rank 12.5 • Science 13%

R package 'seg' for measuring and visualising population segregation

https://github.com/hat-open/hat-syslog • Rank 12.5 • Science 13%

Syslog Server and tools

shd • Rank 12.5 • Science 13%

Show pretty HDD/SSD list

RgoogleMaps • Rank 15.5 • Science 10%

GraphEM • Rank 2.5 • Science 23%

Gaussian graphical models (aka Markov random fields) embedded within an Expectation Maximization algorithm

https://github.com/bio-phys/kinetics-remd • Rank 2.5 • Science 23%

Extracting kinetics from replica exchange molecular dynamics and related methods that produce discontinuous trajectories.

https://github.com/dcavar/sociallenseonline.github.io • Rank 2.5 • Science 23%

social-lense.online website.

https://github.com/datapartnership/mobilkit • Rank 2.5 • Science 23%

A Python Toolkit for Urban Resilience and Disaster Risk Management Analytics using High Frequency Human Mobility Data

https://github.com/aaronpeikert/repro-thesis • Rank 2.5 • Science 23%

https://github.com/batoolmm/exonr • Rank 2.5 • Science 23%

R package for generating beautiful and customizable plots for the exons and introns of any gene

https://github.com/bhklab/ovcsubtypes • Rank 2.5 • Science 23%

https://github.com/amkram/schedule-builder-export • Rank 2.5 • Science 23%

Chrome extension to automatically export UCD Schedule Builder Calendars to Google Calendar