open-imo-cii-calculator
Unofficial open source implementation of the Carbon Intensity Indicator (CII) by the International Maritime Organization (IMO), as outlined in Resolution MEPC.354(78)
sbu-thesis-template
The latex template for Stony Brook University Ph.D. and MS Thesis
planet-webapp
Forest Cloud: The Open Source and Commission Free Application that powers the Trillion Tree Campaign. Visit us to meet reforestation Organizations, individuals and companies who are on a journey to plant, monitor and restore a trillion trees.
https://github.com/dyka3773/db-drift
A command-line tool to visualize the differences between two DB states.
virtuoso
:package: Interact with Virtuoso Open Source database instances from R
pcr
Quality assessing, analyzing and testing the statistical significance of real-time quantitative PCR data
https://github.com/agoose77/jupyterlab-imarkdown
Embed rich output in Markdown cells.
uncoverappLib
Interactive graphical application for clinical assessment of sequence coverage at the base-pair level
https://github.com/crowdstrike/falcon-toolkit
Unleash the power of the Falcon Platform at the CLI
https://github.com/ayaanhossain/sharedb
An on-disk pythonic embedded key-value store for compressed data storage and distributed data analysis
solariot
Leverage your IoT enabled Solar PV Inverter to stream your solar energy usage data to a real time dashboard.
advent-of-code-2023
Frank's Advent of Code written in Rust and executed client-side in WASM
homoplasyfinder
A tool to identify and annotate homoplasies on a phylogeny and sequence alignment
https://github.com/underchemist/nanonispy
A small library written in python 3 to parse Nanonis binary and ascii files
https://github.com/dbraun/touchdesigner_shared
TouchDesigner toxes and small projects
https://github.com/bayer-group/atomic-spinner
Customizable React loading spinner that looks like an atom
envdocument
R package with utilities that quickly collect and format information about the environment where a script is sourced. Facilitates reproducible research practices
instruct
Compact/flexible/fast/strictly-typed/(add other ridiculous demands) object system - similar to Pydantic but focused on `__slot__`ed objects
LMMELSM
R Package for fitting latent multivariate mixed effects location scale models.
https://github.com/argocanada/bgcargodmqc
python package for performing DMQC on BGC-Argo data
https://github.com/datapartnership/datapartnership.github.io
:pencil: Projects & News
grec
Classification of spatial patterns from environmental data through GRadient RECognition
ggh4x
ggplot extension: options for tailored facets, multiple colourscales and miscellaneous
https://github.com/cmake-wheel/cmeel-example
This is an example project, to show how to use cmeel
ttclust
clusterize molecular dynamic trajectories (amber, gromacs, charmm, namd, pdb...)
https://github.com/barbagroup/petibm-rollingpitching
3D rolling and pitching flat plate with PetIBM
https://github.com/alan-turing-institute/dpht
Differentially Private Health Tokens (for Estimating COVID-19 Risk)
https://github.com/alan-turing-institute/python-cmethods
Bias Correction/Adjustment Tools written in Python for Climatic Research
https://github.com/alleninstitute/cortical_coordinates
Code and scripts for used in the generation of cortical streamlines and coordinates for the Allen CCF
https://github.com/adrn/thejoker-paper
Paper describing The Joker https://github.com/adrn/thejoker
programming-language-subreddits-and-their-choice-of-words
How do the different communities talk?
wifi-security.tex
This was my final assignment for Partial Degree in Information and Communication Technology: Maintenance of Cybersecurity ending on 2024-10-11. Due to burnout I was unable to finish it.
https://github.com/conda/conda-standalone
A standalone conda executable built with PyInstaller.
covid-19-excess-deaths-tracker
Source code and data for The Economist's covid-19 excess deaths tracker
confoundr
Diagnostics for confounding of time-varying and other joint exposures
likelihood
Code generated from the Machine Learning course to optimization tasks
https://github.com/cqcl/pytket-pyzx
pytket-pyzx, extensions for pytket quantum SDK
https://github.com/larribas/dagger
Define sophisticated data pipelines with Python and run them on different distributed systems (such as Argo Workflows).
https://github.com/danforthcenter/pcvr
R functions for use with plantCV output
phenocamr
An R Interface and Post-Processing Framework for PhenoCam Web Services
circle-map
A method for circular DNA detection based on probabilistic mapping of ultrashort reads
https://github.com/mueslo/fplore
:open_file_folder: A library for evaluating data generated by FPLO runs :mortar_board:
https://github.com/baxtree/wiki2ssml
Wiki2SSML provides the WikiVoice markup language used for fine-tuning synthesised voice.
https://github.com/rybakov-ks/particleanalyzer
A Computer Vision-based tool for automatic segmentation and size analysis of particles in Scanning Electron Microscope (SEM) images.
https://github.com/asimov-platform/asimov-snapshot-cli
🛠️ ASIMOV Command-Line Interface (CLI) for snapshot management.
https://github.com/ebi-jdispatcher/sss_json_schema
JSON schema for EBI's Job Dispatcher sequence similarity search outputs
nametagger
Named Entity Recognition with the Nametag Maximum Entropy Markov model
https://github.com/crowdstrike/ansible_collection_falcon
Comprehensive toolkit for streamlining your interactions with the CrowdStrike Falcon platform.
https://github.com/brucewlee/lftk
[BEA @ ACL 2023] General-purpose tool for linguistic features extraction; Tested on readability assessment, essay scoring, fake news detection, hate speech detection, etc.
dpca
An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)