https://github.com/alan-turing-institute/dssg19-cochrane-public • Rank 2.2 • Science 23%

https://github.com/hxu296/tariff • Rank 15.2 • Science 10%

The official repository for tariff

cgvsphoto • Rank 5.2 • Science 20%

Computer Graphics vs Real Photographic Images : A Deep-learning approach

RAthena • Rank 12.2 • Science 13%

Connect R to Athena using Boto3 SDK (DBI Interface)

scReClassify • Rank 12.2 • Science 13%

Post hoc cell type classification of single-cell RNA-sequencing data.

BSDA • Rank 15.2 • Science 10%

R package for "Basic Statistics and Data Analysis" web page: https://alanarnholt.github.io/BSDA/

boruta_py • Rank 12.1 • Science 13%

Python implementations of the Boruta all-relevant feature selection method.

distcrete • Rank 15.1 • Science 10%

:chart_with_upwards_trend::point_right::bar_chart: Discretise distributions

giphyr • Rank 15.1 • Science 10%

A R package for giphy API

fma • Rank 15.1 • Science 10%

Data sets from "Forecasting: methods and applications" by Makridakis, Wheelwright & Hyndman (1998)

https://github.com/bytedance/codelocator • Rank 12.1 • Science 13%

https://github.com/cldf/pyigt • Rank 12.1 • Science 13%

Handling Interlinear Glossed Text in python

RVerbalExpressions • Rank 12.1 • Science 13%

:speech_balloon: Create regular expressions easily

indeed • Rank 5.1 • Science 20%

An Implementation of Integrated Differential Expression and Differential Network Analysis for Cancer Biomarker Discovery

DEFormats • Rank 15.1 • Science 10%

:recycle: Differential gene expression data formats converter

https://github.com/datalad/datalad-metalad • Rank 15.1 • Science 10%

Next generation metadata handling

barcode • Rank 12.1 • Science 13%

NGS barcode design and validation.

simex • Rank 15.1 • Science 10%

The simex Package -- This pakage for R implements the simex procedure developed by Cook & Stefanski for dealing with measurement error models, as well as the mcsimex for misclassified data developed by Küchenhoff, Mwalili and Lesaffre.

https://github.com/autodistill/autodistill-grounding-dino • Rank 12.1 • Science 13%

Grounding DINO module for use with Autodistill.

RoughSets • Rank 15.1 • Science 10%

RoughSets package for R System

https://github.com/arcaldwell49/superpowerbook • Rank 2.1 • Science 23%

https://github.com/beegass/deep-q-learning • Rank 2.1 • Science 23%

This is my attempt at implementing the paper "Playing Atari with Deep Reinforcement Learning" By Volodymyr Mnih, Koray Kavukcuoglu, David Silver, Alex Graves, Ioannis Antonoglou, Daan Wierstra and Martin Riedmiller. This is my first attempt at both reading and implementing a research paper.

https://github.com/cvitolo/r_pure • Rank 2.1 • Science 23%

Workflow for flood frequency analysis under uncertainty (R package for hydrological modelling)

https://github.com/cvitolo/geff_notebooks • Rank 2.1 • Science 23%

Jupyter notebooks to post-process fire danger data using Python/xarray

https://github.com/andrew-plowright/tilemanager • Rank 2.1 • Science 23%

Create and detect tiling schemes for raster datasets

https://github.com/aryashah2k/smokeu-net-smoke-column-segmentation-from-satellite-imagery-using-deep-u-net-architecture • Rank 2.1 • Science 23%

A U-Net deep learning model for automated smoke plume segmentation in satellite imagery. The model processes multi-spectral satellite data to generate precise smoke column masks, improving upon manual detection methods. Results demonstrate high accuracy in smoke plume detection with 99.04% validation accuracy and 0.91 Dice coefficient.

talk-forecast-to-fable • Rank 2.1 • Science 23%

https://github.com/ai-forever/ruscode • Rank 2.1 • Science 23%

Official repository for RusCode benchmark dataset (NAACL 2025)

https://github.com/csinva/dnn-ensemble • Rank 2.1 • Science 23%

Testing the properties of ensembled neural networks.

https://github.com/chobbes/cofq • Rank 2.1 • Science 23%

System F in Coq

https://github.com/dkundih/vandal • Rank 2.1 • Science 23%

Data science, Data manipulation and Machine learning library.

https://github.com/chrhansk/time-dependent-tsp • Rank 2.1 • Science 23%

A MIP-based algorithm to solve the Time-Dependent TSP

https://github.com/chains-project/ethereum-ssc • Rank 2.1 • Science 23%

Open science data of "The Multibillion Dollar Software Supply Chain of Ethereum", IEEE Computer, 2022 http://arxiv.org/pdf/2202.07029

3d_milp • Rank 2.1 • Science 23%

Public repository for 3D-MILP paper.

https://github.com/adrn/pal5sbiggestfan • Rank 2.1 • Science 23%

it's Sarah Pearson

ctbi • Rank 12.1 • Science 13%

https://github.com/bytedance/matxscript • Rank 12.1 • Science 13%

A high-performance, extensible Python AOT compiler.

correlationfunnel • Rank 12.1 • Science 13%

Speed Up Exploratory Data Analysis (EDA)

scrublet • Rank 15.1 • Science 10%

Detect doublets in single-cell RNA-seq data

poker • Rank 15.0 • Science 10%

Poker framework for Python

doubletrouble • Rank 12.0 • Science 13%

An R package to identify and classify duplicated genes from whole-genome protein sequence data

DiagrammeRsvg • Rank 15.0 • Science 10%

A utility package for providing SVG export to DiagrammeR graph diagrams

https://github.com/alleninstitute/biccn_m1_evo • Rank 5.0 • Science 20%

Analysis for BICCN cross-species primary motor cortex project

GSALightning • Rank 12.0 • Science 13%

GSALightning: Ultra-Fast Permutation-based Gene Set Analysis

https://github.com/datalad/datalad-ukbiobank • Rank 5.0 • Science 20%

Resources for working with UKBiobank as a DataLad dataset

higlass-scalable-insets • Rank 7.0 • Science 18%

Scalable Insets for HiGlass: a new technique for interactively exploring and navigating large numbers of annotated patterns in multiscale visual spaces such as gigapixel images, matrices, or maps.

s4 • Rank 12.0 • Science 13%

:arrows_counterclockwise: Fast and cheap synchronisation of files using Amazon S3

spinach • Rank 12.0 • Science 13%

Modern Redis task queue for Python 3

coRdon • Rank 15.0 • Science 10%

Codon Usage Analysis and Prediction of Gene Expressivity

chromstaR • Rank 15.0 • Science 10%

Combinatorial and differential ChIP-seq analysis in R

https://github.com/plynx-team/plynx • Rank 12.0 • Science 13%

PLynx is a domain agnostic platform for managing reproducible experiments and data-oriented workflows.

slim • Rank 12.0 • Science 13%

[WIP] web framework provides instant restful api for sql table.

ltmle • Rank 15.0 • Science 10%

Longitudinal Targeted Maximum Likelihood Estimation package

tidylo • Rank 12.0 • Science 13%

Weighted tidy log odds ratio ⚖️

VERSO • Rank 12.0 • Science 13%

Viral Evolution ReconStructiOn (VERSO). The manuscript of the method is available at: https://www.cell.com/patterns/fulltext/S2666-3899(21)00022-2

rags2ridges • Rank 12.0 • Science 13%

Get ridge or die trying - 2 cents

PeacoQC • Rank 14.9 • Science 10%

Peak-based selection of high quality cytometry data

https://github.com/chadagreene/ice-shelf-geometry • Rank 1.9 • Science 23%

Matlab scripts that use all available observations to grow and trim the extents of Antarctic ice shelves.

https://github.com/amazon-science/vigor • Rank 1.9 • Science 23%

firehistory • Rank 1.9 • Science 23%

Functions to aid querying DBCA fire history data

https://github.com/allisonhorst/esm206-f2021-labs • Rank 1.9 • Science 23%

Compiled repo of ESM 206 labs (Fall 2021)

https://github.com/aryashah2k/huggingface-aicrowd-gui-downloader • Rank 1.9 • Science 23%

Downloading Datasets from HuggingFace and AICrowd using APIs made easy using Desktop GUI

https://github.com/aryashah2k/chaky-car-price-predictor • Rank 1.9 • Science 23%

A1 ML 2024 Car Price Prediction WebApp

https://github.com/daeh/emotionreasoning-cogsci22 • Rank 1.9 • Science 23%

Emotion Reasoning. Models, analyses and data for the 2022 CogSci paper, "Reasoning about the antecedents of emotions: Bayesian causal inference over an intuitive theory of mind"

https://github.com/bionanoimaging/cellstorm-tensorflow • Rank 1.9 • Science 23%

Image-to-Image network to localize dSTORM events in Tensorflow. Publication link: https://arxiv.org/abs/1804.06244

https://github.com/bchao1/awesome-light-field-processing • Rank 1.9 • Science 23%

A curated list of light field synthesis and light field reconstruction papers.

https://github.com/abitter/ptos • Rank 1.9 • Science 23%

Practices and Tools of Open Science: Topic Modeling

chromswitch • Rank 11.9 • Science 13%

An R/Bioconductor package for detecting chromatin state switches

https://github.com/bytedance/bhook • Rank 11.9 • Science 13%

:fire: ByteHook is an Android PLT hook library which supports armeabi-v7a, arm64-v8a, x86 and x86_64.

IMIX • Rank 11.9 • Science 13%

Integrative genomics using a multivariate mixture model framework

nabor • Rank 14.9 • Science 10%

R package wrapping libnabo: fast K Nearest Neighbor search for low dimensions

ideas • Rank 11.9 • Science 13%

Easy creation of custom import hooks to experiment on alternatives to Python's syntax; see https://aroberge.github.io/ideas/docs/html/

https://github.com/crytic/amarna • Rank 11.9 • Science 13%

Amarna is a static-analyzer and linter for the Cairo programming language.

bioCancer • Rank 14.9 • Science 10%

:cancer: :free: A Shiny App for Interactive Multi-OMICS Cancer Data Visualization and analysis

keepalive • Rank 11.9 • Science 13%

An HTTP handler for urllib that supports HTTP 1.1 and keepalive in both Python 2.x and 3.x versions

bayesCT • Rank 14.9 • Science 10%

Adaptive Bayesian Clinical Trial

lambdr • Rank 11.9 • Science 13%

Run R containers on AWS Lambda

https://github.com/bentoml/bentoctl • Rank 11.9 • Science 13%

Fast model deployment on any cloud 🚀

shinymodels • Rank 11.9 • Science 13%

mcx • Rank 11.9 • Science 13%

Express & compile probabilistic programs for performant inference on CPU & GPU. Powered by JAX.

pystackreg • Rank 14.9 • Science 10%

A python extension for the automatic alignment of a source image or a stack (movie) to a target image/reference frame.

growthcurver • Rank 11.9 • Science 13%

Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whose parameters (the growth rate, the initial population size, and the carrying capacity) provide meaningful population-level information with straight-forward biological interpretation.

vidger • Rank 14.9 • Science 10%

Make rapid visualizations of RNA-seq data in R

aedat • Rank 11.9 • Science 13%

A fast AEDAT 4 python decoder.

Rphylopars • Rank 14.8 • Science 10%

Phylogenetic Comparative Tools for Missing Data and Within-Species Variation

imreg_dft • Rank 14.8 • Science 10%

Image registration using discrete Fourier transform.

brglm • Rank 14.8 • Science 10%

Bias Reduction in Binomial-Response Generalized Linear Models

robumeta • Rank 14.8 • Science 10%

Robust Variance Meta-Regression

https://github.com/braun-steven/dafne • Rank 4.8 • Science 20%

Code for our paper "DAFNe: A One-Stage Anchor-Free Deep Model for Oriented Object Detection".

https://github.com/azavea/python-omgeo • Rank 11.8 • Science 13%

OMGeocoder - A python geocoding abstraction layer

intellect • Rank 11.8 • Science 13%

DSL and Rules Engine For Python

tsne • Rank 14.8 • Science 10%

A python wrapper for Barnes-Hut tsne

plspm • Rank 11.8 • Science 13%

A Python 3 implementation of the Partial Least Squares Path Modeling (PLS-PM) algorithm.

MM • Rank 11.8 • Science 13%

the multiplicative multinomial distribution

citationdata • Rank 1.8 • Science 23%

Influential references dataset

ccdf • Rank 1.8 • Science 23%

Distribution-Free Single-cell Differential Expression Analysis

https://github.com/catalyst-cooperative/gridkit • Rank 1.8 • Science 23%

GridKit is an power grid extraction toolkit

https://github.com/c7w/reqman-frontend • Rank 1.8 • Science 23%

Your Requirement Management Servant, ReqMan. Project for Software Engineering of 2022 Spring.

https://github.com/chris-santiago/cookie • Rank 1.8 • Science 23%

Cookiecutter template

https://github.com/bluebrain/brainmolecularatlas • Rank 1.8 • Science 23%

Brain Molecular Atlas