https://github.com/avik-pal/wandb.jl
Unofficial Julia bindings for logging experiments to wandb.ai
https://github.com/tesserato/envelope
Python module to extract the envelope of signals.
mrbles
Decoding and analysis software for MRBLEs (Microspheres with Ratiometric Barcode Lanthanide Encoding).
https://github.com/coqui-ai/coqpit
Simple but maybe too simple config management through python data classes. We use it for machine learning.
ltfat
Mirror of the Large Time-Frequency Analysis Toolbox http://ltfat.sourceforge.net/
pvcaptest
Collection of functions and jupyter notebooks to partially automate running a capacity test following ASTM E2848.
ChargyDesktopApp
The Chargy E-Mobility Transparency Application for Windows, Mac OS X and Linux (based on Electron)
FSAdata
FSAdata contains data for use in common fisheries stock analyses. See installation instructions further below.
https://github.com/activitywatch/activitywatch.github.io
Official website for ActivityWatch
https://github.com/araffin/robotics-rl-srl
S-RL Toolbox: Reinforcement Learning (RL) and State Representation Learning (SRL) for Robotics
emirge
EMIRGE reconstructs full length ribosomal genes from short read sequencing data.
rflsgen
Neutral landscape generator that allows users to set targets on landscape indices.
acquisition
Acquisition is a mechanism that allows objects to obtain attributes from the containment hierarchy they're in.
aicon
AICON2: A program for calculating transport properties quickly and accurately
https://github.com/cytoscape/cytoscape.js-blog
The Cytoscape.js blog, using Github pages and Jekyll
https://github.com/andreasmadsen/clarify
Remove nodecore related stack trace noise
poopylab_project
An open source biological wastewater treatment simulation software...
3d-forest
Visualization, processing and analysis of Lidar point clouds, mainly focused on forest environment. New version of 3D Forest. Process files with terabytes of data. Edit new point attributes. Simple addition of new features by plugins.
https://github.com/cropgeeks/flapjack-bytes
BrAPI enabled Flapjack style graphical previews of genotype data
https://github.com/devrimcavusoglu/pybboxes
Light weight toolkit for bounding boxes providing conversion between bounding box types and simple computations.
https://github.com/bids-apps/rshrf
Resting state HRF estimation from BOLD-fMRI signal
https://github.com/core-bioinformatics/noisyr
Package documentation and examples:
spfilter
Semiparametric Spatial Filtering with Eigenvectors in (Generalized) Linear Models
hicassembler
Software to assemble contigs/scaffolds into chromosomes using Hi-C data
binning-refiner
Improving genome bins through the combination of different binning programs
https://github.com/cvxgrp/cvx_short_course
Materials for a short course on convex optimization.
https://github.com/crowdstrike/ember-url-hash-polyfill
Support for in/inter page linking / scrolling with hashes in EmberJS
jointcalib
Repository for a small package for joint calibration of totals, quantiles and other metrics
Complete_Street_Rule
The Complete Street Rule for ArcGIS CityEngine is a scenario oriented design tool intended to enable users to quickly create procedurally generated multimodal streets.
https://github.com/cair/pytsetlinmachinecuda
Massively Parallel and Asynchronous Architecture for Logic-based AI
msc-animet
MSC AniMet is a simple tool enabling users to interact with MSC Open Data weather data and create custom weather animations for any area in the world. The resulting animations can be downloaded and shared with a permalink.
https://github.com/cran-task-views/phylogenetics
CRAN Task View: Phylogenetics
https://github.com/billyjov/awesome-nx
An awesome list that curates the best Nrwl Nx tools, tutorials, articles and more.
https://github.com/computationalphysiology/modelgraph
A tool for visualizing dependencies between different components of your model
https://github.com/anzure/homebridge-netatmo-security
Netatmo Security plugin for Homebridge
https://github.com/rlespinasse/git-commit-data-action
Action to expose git commit info
https://github.com/norskregnesentral/skchange
skchange provides sktime-compatible change detection and changepoint-based anomaly detection algorithms
https://github.com/joewalnes/smoothie
Smoothie Charts: smooooooth JavaScript charts for realtime streaming data
swfscAirDAS
Functions for processing and analyzing aerial survey DAS data generated by the TURTLE, PHOCOENA, and CARETTA programs at the Southwest Fisheries Science Center
latenetwork
The latenetwork package provides tools for causal inference under noncompliance with treatment assignment and network interference of unknown form. The methods are developed by Hoshino and Yanagi (2023) https://arxiv.org/abs/2108.07455 .
https://github.com/argosopentech/argos-translate-gui
Graphical user interface for Argos Translate
QGameTheory
General purpose toolbox for simulating quantum versions of game theoretic models. Quantum versions of models that have been handeled are: Penny Flip Game, Prisoner's Dilemma, Two Person Duel, Battle of the Sexes, Newcomb's Paradox, Hawk and Dove Game and Monty Hall Problem.
cortexpy
A Python API for manipulating (Mc)Cortex de novo assembly graph and link data
https://github.com/chaoss/afos-africanopensource
AFOS (AfricanOpenSource) is a platform for showcasing Open Source projects build by Africans to increase visibility, and expose the projects to more contributors. This was a GitHub-funded project
https://github.com/andreasmadsen/python-textualheatmap
Create interactive textual heat maps for Jupiter notebooks
coachco2
CoachCO2 aims to raise user awareness about their carbon footprint, notably based on their transport data.
https://github.com/crytic/fluxture
A crawling framework for blockchains and peer-to-peer systems
https://github.com/a-b-street/ltn
Design low-traffic neighbourhoods in your web browser
disc
A highly scalable and accurate inference of gene expression and structure for single-cell transcriptomes using semi-supervised deep learning.
https://github.com/activitywatch/awesome-activitywatch
A list of awesome ActivityWatch resources
coreCT
R package for programmatic analysis of sediment cores scanned using computed tomography imaging
multifunc
A package for the analysis of how drivers affect multiple functions in a system.
