Scientific Software
Updated 10 months ago

SimpleSDMLayers.jl and GBIF.jl — Peer-reviewed • Rank 5.1 • Science 59%

SimpleSDMLayers.jl and GBIF.jl: A Framework for Species Distribution Modeling in Julia - Published in JOSS (2021)

Updated 10 months ago

SuiteSparseMatrixCollection • Rank 7.1 • Science 57%

A straightforward interface to the SuiteSparse Matrix Collection

Updated 10 months ago

readxl • Rank 28.1 • Science 36%

Read excel files (.xls and .xlsx) into R 🖇

Scientific Software
Updated 10 months ago

SolarSpatialTools — Peer-reviewed • Rank 5.1 • Science 59%

SolarSpatialTools: A Python package for spatial solar energy analyses - Published in JOSS (2024)

Earth and Environmental Sciences Mathematics (43%) Neuroscience (40%)
Scientific Software · Peer-reviewed
Updated 10 months ago

https://github.com/lancedb/lance • Rank 28.1 • Science 36%

Modern columnar data format for ML and LLMs implemented in Rust. Convert from parquet in 2 lines of code for 100x faster random access, vector index, and data versioning. Compatible with Pandas, DuckDB, Polars, Pyarrow, and PyTorch with more integrations coming..

Updated 10 months ago

paleotree • Rank 15.1 • Science 49%

R library for analyzing, time-scaling and simulating phylogenies of extinct/fossil lineages. Also plots diversity curves for stratigraphic range data and phylogenies, including combinations of these two data types.

Updated 10 months ago

https://github.com/astropy/astroscrappy • Rank 18.1 • Science 46%

Speedy Cosmic Ray Annihilation Package in Python

Updated 10 months ago

falcon • Rank 28.1 • Science 36%

The no-magic web API and microservices framework for Python developers, with a focus on reliability and performance at scale.

Updated 10 months ago

configs • Rank 10.0 • Science 54%

Config files used to define parameters specific to compute environments at different Institutions

Updated 10 months ago

CVrisk • Rank 10.0 • Science 54%

R package to calculate cardiovascular risk scores

Updated 10 months ago

bordado • Rank 7.0 • Science 57%

Create, manipulate, and split coordinates

Updated 10 months ago

https://github.com/holoviz/hvplot • Rank 28.0 • Science 36%

A high-level plotting API for pandas, dask, xarray, and networkx built on HoloViews

Updated 10 months ago

ResourceSelection • Rank 15.0 • Science 49%

Resource Selection (Probability) Functions for Use-Availability Data in R

Updated 10 months ago

plateypus • Rank 10.0 • Science 54%

Processes and plots high throughput cytometry experiments through a GUI

Updated 10 months ago

https://github.com/cgre-aachen/open_ar_sandbox • Rank 7.0 • Science 57%

open-AR-Sandbox is a project to enable haptic interaction with geoscientific content in AR-Sandboxes.

Updated 10 months ago

scikit-build-core • Rank 10.0 • Science 54%

A next generation Python CMake adaptor and Python API for plugins

Updated 10 months ago

gds18 • Rank 5.0 • Science 59%

Geographic Data Science'18

Updated 10 months ago

themostdangerouswritingapp • Rank 10.0 • Science 54%

If you stop typing for more than five seconds, all progress will be lost.

Updated 10 months ago

octa • Rank 7.0 • Science 57%

The OCTA Python toolbox was created by Van Geert, Bossens, and Wagemans (2021) as a tool for researchers to create stimuli varying in order and complexity on different dimensions.

Updated 10 months ago

aRxiv • Rank 18.0 • Science 46%

Programmatic interface to the Arxiv API

Updated 10 months ago

heplots • Rank 15.0 • Science 49%

Visualizing Hypothesis Tests in Multivariate Linear Models, http://friendly.github.io/heplots/

Updated 10 months ago

@stdlib/complex-reim • Rank 20.0 • Science 44%

Return the real and imaginary components of a complex number.

Updated 10 months ago

@stdlib/complex-reimf • Rank 20.0 • Science 44%

Return the real and imaginary components of a single-precision complex floating-point number.

Updated 10 months ago

qqman • Rank 18.0 • Science 46%

An R package for creating Q-Q and manhattan plots from GWAS results

Updated 10 months ago

@stdlib/utils-property-names • Rank 20.0 • Science 44%

Return an array of an object's own enumerable and non-enumerable property names.

Updated 10 months ago

CoordinateCleaner • Rank 15.0 • Science 49%

Automated flagging of common spatial and temporal errors in biological and palaeontological collection data, for the use in conservation, ecology and palaeontology.

Updated 10 months ago

dkpro-cassis • Rank 7.0 • Science 57%

UIMA CAS processing library written in Python

Updated 10 months ago

countsimQC • Rank 15.0 • Science 49%

countsimQC - Compare characteristic features of count data sets

Updated 10 months ago

coremltools • Rank 28.0 • Science 36%

Core ML tools contain supporting tools for Core ML model conversion, editing, and validation.

Updated 10 months ago

GenericTensorNetworks • Rank 10.0 • Science 54%

Generic tensor networks for solution space properties.

Updated 10 months ago

externdata • Rank 7.0 • Science 57%

:page_facing_up: Modelica library for data I/O of CSV, INI, JSON, MATLAB MAT, SSV, TIR, Excel XLS/XLSX and XML files

Updated 10 months ago

pytriton • Rank 20.0 • Science 44%

PyTriton is a Flask/FastAPI-like interface that simplifies Triton's deployment in Python environments.

Updated 10 months ago

pint-pulsar • Rank 17.9 • Science 46%

PINT is not TEMPO3 -- Software for high-precision pulsar timing

Updated 10 months ago

fairworkflows • Rank 9.9 • Science 54%

A python library for constructing, modifying and publishing scientific workflows described using semantic technologies.

Updated 10 months ago

fastquorum • Rank 4.9 • Science 59%

Pipeline to produce consensus reads using unique molecular indexes/barcodes (UMIs)

Updated 10 months ago

cellxgene • Rank 17.9 • Science 46%

An interactive explorer for single-cell transcriptomics data

Updated 10 months ago

git-issue • Rank 9.9 • Science 54%

Git-based decentralized issue management

Updated 10 months ago

seisplotjs • Rank 9.9 • Science 54%

Javascript modules for parsing, manipulating and plotting seismic data.

Updated 10 months ago

DBI • Rank 27.9 • Science 36%

A database interface (DBI) definition for communication between R and RDBMSs

Updated 10 months ago

cgns • Rank 9.9 • Science 54%

The CFD General Notation System (CGNS) provides a standard for recording and recovering computer data associated with the numerical solution of fluid dynamics equations. All development work and bug fixes should be based off the 'develop' branch, CGNS uses the branching model Gitflow.

Updated 10 months ago

env_canada • Rank 27.9 • Science 36%

Environment Canada Weather Data

Updated 10 months ago

asdf-astropy • Rank 17.9 • Science 46%

This is the extension library for ASDF to provide support for Astropy.

Updated 10 months ago

SphericalFunctions • Rank 9.9 • Science 54%

Spherical functions of arbitrary float types

Updated 10 months ago

rnasplice • Rank 6.9 • Science 57%

rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis

Updated 10 months ago

invgamma • Rank 14.9 • Science 49%

A light weight package for the dpqr functions for the inverse gamma, inverse chi-squared, and inverse exponential distributions in R

Updated 10 months ago

gemsmith • Rank 19.9 • Science 44%

A command line interface for smithing Ruby gems.

Updated 10 months ago

hypertools • Rank 17.9 • Science 46%

A Python toolbox for gaining geometric insights into high-dimensional data

Updated 10 months ago

google-meridian • Rank 19.9 • Science 44%

Meridian is an MMM framework that enables advertisers to set up and run their own in-house models.

Updated 10 months ago

satellighte • Rank 9.9 • Science 54%

📡 PyTorch Lightning Implementations of Recent Satellite Image Classification !

Updated 10 months ago

https://github.com/biojulia/twobit.jl • Rank 4.9 • Science 59%

Support for working with 2Bit formatted sequence data files

Updated 10 months ago

mdba-gauge-getter • Rank 9.9 • Science 54%

MDBA Gauge Getter provides a unified and simple interface to collect surface water data from Australian national and state water portals..

Updated 10 months ago

sar_snowmelt_timing • Rank 4.9 • Science 59%

This repository contains notebooks and tools to identify snowmelt timing using time series analysis of backscatter of Sentinel-1 C-band SAR.