multidplyr • Rank 17.4 • Science 23%

A dplyr backend that partitions a data frame over multiple processes

questea • Rank 1.4 • Science 39%

QuestionnaireEmbeddingsAnalysis - innovative approach to extracting richer information from clinical survey

cabals • Rank 1.4 • Science 39%

Tools for agent-based life cycle sustainablity assessment

https://github.com/egarpor/rotasym • Rank 1.4 • Science 39%

Tests for rotational symmetry on the hypersphere. Software companion for "On optimal tests for rotational symmetry against new classes of hyperspherical distributions"

tfds-defect-detection • Rank 1.4 • Science 39%

A tensorflow dataset builder for semantic defect segmentation datasets like MVTEC and VisA. Includes options to generate synthetic anomalies

https://github.com/banterle/zeroshot-hdrv • Rank 1.4 • Science 39%

https://github.com/bagustris/speech-recognition-course • Rank 1.4 • Science 39%

Material for learning speech recognition, based on Microsoft teaching material on EdX

https://github.com/bai-li-noaa/model_comparison_paper • Rank 1.4 • Science 39%

missForest • Rank 17.4 • Science 23%

missForest is a nonparametric, mixed-type imputation method for basically any type of data for the statistical software R.

Phonetics • Rank 4.4 • Science 36%

A collection of functions to analyze phonetic data

flowcatchr • Rank 4.4 • Science 36%

A framework for tracking and analyzing flowing blood cells in time lapse microscopy images

https://github.com/cosima/access-om3 • Rank 4.4 • Science 36%

Deprecated source code repo for ACCESS-OM3 global ocean-sea ice-wave coupled model

https://github.com/danielmwatkins/icedrift • Rank 4.4 • Science 36%

Library for processing sea ice drifting buoys

codemeta-harvester • Rank 4.4 • Science 36%

Harvest and aggregate codemeta/schema.org software metadata from source repositories and service endpoints, automatically converting from known metadata schemes in the process

tethysts • Rank 9.4 • Science 31%

https://github.com/cthoyt/onto2nx • Rank 7.4 • Science 33%

Converts OWL ontologies and OBO to NetworkX Graphs

effsize • Rank 17.4 • Science 23%

Effsize - a package for efficient effect size computation

logbook • Rank 27.4 • Science 13%

A cool logging replacement for Python.

https://github.com/longxingtan/time-series-prediction • Rank 14.4 • Science 26%

tfts: Time Series Deep Learning Models in TensorFlow

recount • Rank 17.4 • Science 23%

R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/

https://github.com/cosima/ocean-regrid • Rank 4.4 • Science 36%

Regrid global ocean data in 3d.

https://github.com/sourestdeeds/firefly • Rank 4.4 • Science 36%

Firefly (pip install firefly-tess) is a self-contained python EDA pipeline which uses TransitFit to fit TESS lightcurves (time-series data), capable of fully automating the data retrieval required.

https://github.com/catalalang/french-law • Rank 4.4 • Science 36%

https://github.com/google-deepmind/iris • Rank 4.4 • Science 36%

gtfsio • Rank 14.4 • Science 26%

Read and Write General Transit Feed Specification (GTFS)

EpiDISH • Rank 17.4 • Science 23%

This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representing a mixture of such cell-types. Inference proceeds via one of 3 methods (Robust Partial Correlations-RPC, Cibersort (CBS), Constrained Projection (CP)), as determined by user.

arsenal • Rank 17.3 • Science 23%

An Arsenal of 'R' Functions for Large-Scale Statistical Summaries

https://github.com/crowdstrike/tailwind-toucan-base • Rank 14.3 • Science 26%

Base Tailwind config for the Toucan design system.

citation-resolve • Rank 12.3 • Science 28%

convert document identifiers such as DOI, ISBN, arXiv ID to bibliographic reference.

multicore-tsne • Rank 17.3 • Science 23%

Parallel t-SNE implementation with Python and Torch wrappers.

https://github.com/bionanoimaging/bionanoimaging.github.io • Rank 4.3 • Science 36%

Repository for hosting the website files

247-cfe • Rank 4.3 • Science 36%

Explore the impacts of 24/7 Carbon-Free Energy PPAs

https://github.com/bytedance/kmax-deeplab • Rank 4.3 • Science 36%

a PyTorch re-implementation of ECCV 2022 paper based on Detectron2: k-means mask Transformer.

https://github.com/becavin-lab/checkatlas • Rank 4.3 • Science 36%

One liner tool to check the quality of your single-cell atlases.

rhdf5filters • Rank 17.3 • Science 23%

Distributing additional HDF5 compression filters as an R package. Intended to be used with rhdf5, however the compiled filters can also be used with external applications.

https://github.com/broadinstitute/lrma-aou1-panel-creation • Rank 4.3 • Science 36%

Pipelines and evaluations covering integration, phasing, and imputation of short and structural variants for the AoU Phase 1 long-reads callset.

pyramidtabnet • Rank 4.3 • Science 36%

Official PyTorch implementation of PyramidTabNet: Transformer-based Table Recognition in Image-based Documents

https://github.com/compas-dev/compas_cloud • Rank 4.3 • Science 36%

COMPAS Remote Procedure Calls using websockets

launch-stats • Rank 4.3 • Science 36%

Space launch statistics, charts & infographics made in Python with the Launch Library 2 API.

genoflu • Rank 4.3 • Science 36%

Influenza data pipeline to automate genotyping assignment

https://github.com/daijiang/rtrees • Rank 4.3 • Science 36%

rtrees: an R package to assemble phylogenetic trees from mega-trees

osmextract • Rank 14.3 • Science 26%

Download and import OpenStreetMap data from Geofabrik and other providers

harveststat-africa • Rank 4.3 • Science 36%

HarvestStat-Africa: Open Access Harmonized Subnational Crop Statistics

https://github.com/boothgroup/gpsket • Rank 4.3 • Science 36%

GPS plugin for NetKet (www.netket.org), introducing new models, optimizers and Fermionic functionality.

https://github.com/cda-tum/mnt-nanoplacer • Rank 4.3 • Science 36%

NanoPlaceR: An open-source framework for placement and routing of Field-coupled Nanotechnologies based on reinforcement learning.

pip-methodology • Rank 4.3 • Science 36%

Methodology page for the Poverty and Inequality Platform.

https://github.com/complexdatacollective/network-canvas-ui • Rank 4.3 • Science 36%

Styles and components for use in https://networkcanvas.com

https://github.com/databio/hub.bulker.io • Rank 4.3 • Science 36%

Bulker registry

https://github.com/pdlporters/pdl-graphics-plplot • Rank 4.3 • Science 36%

https://github.com/broadinstitute/cromwhelm • Rank 4.3 • Science 36%

Tentative first steps into the world of helm charts

https://github.com/alan-turing-institute/learn-azure • Rank 4.3 • Science 36%

Repository for generalised learning materials on Azure

https://github.com/chains-project/classport • Rank 4.3 • Science 36%

Passports for Java class files

rivamap • Rank 7.3 • Science 33%

an automated river analysis and mapping engine

https://github.com/sparks-baird/mp-time-split • Rank 7.3 • Science 33%

Use time-splits for Materials Project entries for generative modeling benchmarking.

ForC • Rank 7.3 • Science 33%

Global Forest Carbon Database

scikit-surgeryarucotracker • Rank 7.3 • Science 33%

SciKit-SurgeryArUcoTracker is an interface to OpenCV's ArUco tag tracking routines, that follows the same interface as other SciKit-Surgery trackers.

hydropandas • Rank 14.3 • Science 26%

Module for loading observation data into custom DataFrames

rols • Rank 17.3 • Science 23%

An R package to query EBI's Ontology Lookup Service (OLS)

https://github.com/architecture-building-systems/cityenergyanalyst-gui • Rank 4.2 • Science 36%

This is the official Graphical User Interface of the City Energy Analyst (CEA)

https://github.com/0xade1a1de/usb-injection • Rank 4.2 • Science 36%

USB device hardware core with modified behaviour capable of injecting transmissions on behalf of other devices

https://github.com/alan-turing-institute/hut23-linear-algebra • Rank 4.2 • Science 36%

Repository for the Linear Algebra reading group

https://github.com/catalalang/dates-calc • Rank 4.2 • Science 36%

Formally specified computations on dates

hybridlfpy • Rank 7.2 • Science 33%

Biophysics-based prediction of LFPs from point-neuron networks

ngcgh • Rank 7.2 • Science 33%

Tools for producing pseudo-cgh of next-generation sequencing data

klic • Rank 7.2 • Science 33%

R package for KLIC: Kernel Learning Integrative Clustering

MARSS • Rank 17.2 • Science 23%

Multivariate Autoregressive State-Space Modeling with R

infrared • Rank 14.2 • Science 26%

Plugin based framework that aims to provide an easy-to-use CLI for Ansible based projects

https://github.com/biocore/zebra_filter • Rank 4.2 • Science 36%

Filtering out false taxonomic hits from shotgun sequencing based on genome coverage

nestli • Rank 4.2 • Science 36%

Benchmarking building automation and control systems

https://github.com/bertsky/ocrd_doxa • Rank 4.2 • Science 36%

OCR-D wrapper for DoxaPy image binarization via locally adaptive thresholding

https://github.com/flatironinstitute/sparse_dot • Rank 14.2 • Science 26%

Python wrapper for Intel Math Kernel Library (MKL) matrix multiplication

arboreto • Rank 14.2 • Science 26%

A scalable python-based framework for gene regulatory network inference using tree-based ensemble regressors.

combat • Rank 14.2 • Science 26%

pyComBat is a Python 3 implementation of ComBat, one of the most widely used tool for correcting technical biases, called batch effects, in microarray expression data.

https://github.com/bytedance/ipmb • Rank 14.2 • Science 26%

An interprocess message bus system built in Rust.

https://github.com/clariah/wp4-queries • Rank 4.2 • Science 36%

Repository for researcher-provided SPARQL queries on Linked structured data.

https://github.com/bluebrain/dir-content-diff • Rank 4.2 • Science 36%

Simple tool to compare directory contents and get differences using smart comparators.

recip • Rank 4.2 • Science 36%

https://github.com/cupy/cupy.dev • Rank 4.2 • Science 36%

The CuPy Website

toxicr • Rank 4.2 • Science 36%

auriga • Rank 4.2 • Science 36%

A neural network for predicting population parameters

yyjsonr • Rank 14.2 • Science 26%

Fast JSON package for R

methylnet • Rank 7.2 • Science 33%

Modular framework for deep learning predictions on methylation data.

pcaPP • Rank 14.2 • Science 26%

R package pcaPP: Robust PCA by Projection Pursuit

https://github.com/bertsky/workflow-configuration • Rank 4.2 • Science 36%

a makefilization for OCR-D workflows, with configuration examples

https://github.com/ap6yc/mrshudson • Rank 4.2 • Science 36%

A Python scientific project assistant package in the spirit of DrWatson.jl

miceFast • Rank 14.2 • Science 26%

R enviroment - fast imputations :dragon:

https://github.com/cran-task-views/spatiotemporal • Rank 4.2 • Science 36%

CRAN Task View: Handling and Analyzing Spatio-Temporal Data

https://github.com/cwwhitney/hortiprimed • Rank 4.2 • Science 36%

Process of modeling the expected effects of priming tomato plants

hspfbintoolbox • Rank 4.2 • Science 36%

Command line script and Python package to read time-series from the Hydrological Simulation Program - FORTRAN (HSPF) binary output.

https://github.com/britishgeologicalsurvey/etlhelper • Rank 17.2 • Science 23%

ETL Helper is a Python ETL library to simplify data transfer into and out of databases.

cis • Rank 7.2 • Science 33%

Home of the Community Intercomparison Suite.

mlr3torch • Rank 14.2 • Science 26%

Deep learning framework for the mlr3 ecosystem based on torch

celescope • Rank 14.1 • Science 26%

Single Cell Analysis Pipelines

segmenTier • Rank 7.1 • Science 33%

segmentation of clustering sequences; applicable to RNAseq time-series

scMerge • Rank 17.1 • Science 23%

Statistical approach for removing unwanted variation from multiple single-cell datasets

extract-urls • Rank 4.1 • Science 36%

https://github.com/aclai-lab/solefeatures.jl • Rank 4.1 • Science 36%

Perform feature selection on unstructured and multimodal data!

https://github.com/crowdstrike/monorepo-next • Rank 14.1 • Science 26%

Detach monorepo packages from normal linking

https://github.com/alexeyev/awesome-kyrgyz-nlp • Rank 4.1 • Science 36%

Kyrgyz language processing software, models and datasets.

onednn • Rank 14.1 • Science 26%

oneAPI Deep Neural Network Library (oneDNN)