https://github.com/cnumr/ecoindex_python
Refactoring of ecoindex in one monorepo using polylith pattern
pyfba
A python implementation of flux balance analysis to model microbial metabolism
indicspecies
Studying the statistical relationship between species and groups of sites
https://github.com/clinical-genomics/schug
All you need to know about genes, transcripts and exons
https://github.com/acdh-oeaw/arche-lib
A library providing PHP bindings for the ACDH repository solution.
https://github.com/andrew/purl
A Ruby library for parsing, validating, and generating Package URLs (PURLs) as defined by the PURL specification
emur
The main R package for the EMU Speech Database Management System (EMU-SDMS)
transitland-atlas
an open directory of mobility feeds and operators — powers both Transitland v1 and v2
propr
[OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data
https://github.com/awslabs/dgl-ke
High performance, easy-to-use, and scalable package for learning large-scale knowledge graph embeddings.
https://github.com/comunica/jquery-widget.js
🖼 A jQuery widget to query heterogeneous interfaces using Comunica SPARQL
https://github.com/althonos/cksfv.rs
A 10x faster drop-in reimplementation of cksfv using Rust and the crc32fast crate.
hagelslag
Hagelslag supports segmentation and tracking of weather fields and scalable verification, including performance diagrams and reliability diagrams.
RJMCMCNucleosomes
Bioconductor Package - Genome-Wide Nucleosome Positioning in R with an optimized section in C++
https://github.com/ami-iit/bipedal-locomotion-framework
Suite of libraries for achieving bipedal locomotion on humanoid robots
clust
Automatic and optimised consensus clustering of one or more heterogeneous datasets
cpg-miner
A tool that is able to extract source code and various IRs from a given CPG and method name.
https://github.com/colemonnahan/fcwhales
Analysis of Francisco Coloane humpback whale population
https://github.com/christinahedges/characterizethis
What should we characterize? This.
https://github.com/bueler/nade
webpage for Bueler's graduate course in numerical analysis of differential equations (MATH 615)
https://github.com/andreww/pyrts_models
Python module to manipulate "RTS" formatted tomographic models of the mantle
https://github.com/bagustris/exvo2022
Repo for ExVo 2022 Challenge, forked from humaAI
https://github.com/broadinstitute/carrot-example-test
A repo containing a basic example test to run using CARROT
https://github.com/bryanbocao/incompletecode
Self-contained Reinforcement Learning Algorithms.
https://github.com/amzoss/rvis-dm2019
A two-day workshop on visualization in R using ggplot2, plotly, flexdashboards, and shiny
https://github.com/adibender/pammtutorial-smj
Code and materials to reproduce graphics in "A generalized additive model approach to time-to-event analysis"
entropy-core-evolution
Code and data for the "entropy plateaus" paper (Altamura et al. 2025)
ceda
Concatenated Files Fixing Errors in the California Elections Data Archive (CEDA)
https://github.com/cthoyt/vsmo
Revival of the Vector Surveillance and Management Ontology
https://github.com/aidanmorales/michigan_big_tree_map
An interactive map of Michigan's big trees, sourced from the Michigan Big Tree Database.
https://github.com/baimamboukar/air-quality-socioeconomic-analysis-research
Mapping Socioeconomic Air Quality Disparities in Rwanda Using Sentinel-5P TROPOMI Data in Google Earth Engine
https://github.com/broadinstitute/2024-09-20-unix-shell-lesson
Based on https://github.com/datacarpentry/shell-genomics/
https://github.com/brody-lab/trialhistory_lapses_ea
This repository contains code for generating figures for the manuscript "Trial-history biases in evidence accumulation can give rise to apparent lapses"
https://github.com/aliireza/ddc-ra
Scheduling - A Secret Sauce For Resource Disaggregation
https://github.com/bueler/fluid-solid-seminar
UAF Math 692 Graduate Seminar in Spring 2025
https://github.com/bueler/nla
webpage for Bueler's graduate course in numerical linear algebra (MATH 614)
https://github.com/aravind-j/viabilitymetrics
Seed Viability Calculations and Curve Fitting
https://github.com/adrientaudiere/greenalgor
Compute ecological footprint in R
https://github.com/acdh-oeaw/tunico-data
TUNICO corpus data + generator for NoSkE verticals
https://github.com/abbiodiversity/mammalmodels
ABMI mammal species density estimation and habitat modeling
https://github.com/dmetivie/robust-randomized-quasi-monte-carlo-paper-code
Code of the paper The Robust Randomized Quasi Monte Carlo method, applications to integrating singular functions by E. Gobet M. Lerasle and D. Métivier
https://github.com/ammarlodhi255/fine-grained-approach-to-wrist-pathology-recognition
This repository contains the official code for the paper "Learning from the Few: Fine-grained Approach to Wrist Pathology Recognition on a Limited Dataset".
https://github.com/csdms/best-practices
Slides on CSDMS-themed best practices in geoscientific software development
https://github.com/atarashansky/useful_code_snippets
A collection of useful code snippets with usage examples.
tlcs
The repository for the replication package of the paper "On the Effectiveness of Transfer Learning for Code Search."
https://github.com/bagustris/machinery-asd
masd: machinery anomalous sound detection
https://github.com/barbagroup/snake-lips
Numerical study of the effect of the lips on the aerodynamics of the gliding snake
https://github.com/ccp-eva/apeti
ApeTI: A Thermal Image Dataset for Face and Nose Segmentation with Apes
https://github.com/cgohlke/fcsfiles
Read fluorescence correlation spectroscopy (FCS) data files.
https://github.com/aestears/co-sgs-paper
Code for the manuscript "Water availability dictates how plant traits predict demographic rates" (Ecology, 2022)
https://github.com/aroneys/globdb_processing
Processing scripts for GlobDB (https://globdb.org)
https://github.com/aryashah2k/quaclrs-quasi-supervised-audio-classification-by-learning-representations-from-spectrograms
RTML Research titled "QUACLRS: QUasi-supervised Audio Classification by Learning Representations from Spectrograms"
lhs
Provides a number of methods for creating and augmenting Latin Hypercube Samples and Orthogonal Array Latin Hypercube Samples
