magickGUI
an R package that provides GUI tools for interactive image processing with the R package 'magick'
https://github.com/jss95/araviq6
Python package for NDArray-based processing of QVideoFrame with Qt6.
https://github.com/cheind/inpaint
:pencil2: Inpaint is a C++ library providing image inpainting algorithms
https://github.com/biomedia/mirtk
The Medical Image Registration ToolKit (MIRTK), the successor of the IRTK, contains common CMake build configuration files, core libraries, and basic command-line tools. Extension packages are hosted by the MIRTK GitHub group at
https://github.com/bchao1/poissonpy
📈 poissonpy is a Python Poisson Equation library for scientific computing, image and video processing, and computer graphics.
https://github.com/nsembleai/nsvision
nsvision is the image data pre and post processing and data augmentation library. It provides utilities for working with image data.
https://github.com/amirabbasasadi/persianocr
Simple word-level OCR program for the Persian language based on Recurrent Neural Networks using Pytorch and OpenCV
https://github.com/cytomining/cytominer-vm
[DEPRECATED] Packer scripts to create VMs for running image-based profiling workflows on a cluster
https://github.com/charlespikachu/classical-image-processing-algorithms
Implementations of some classical image processing algorithms using matlab.
dosymetric-image-reconstruction
Reconstructing dosimetric images using a deconvoluted physical model
thorimage-sync_2p-analysis
Notebook to analyze ThorImage + ThorSync 2-photon data with light stimulation.
https://github.com/seu-allen-codebase/v3d-py-helper
Make Vaa3D functions accessible for high-performance python computation.
complexity-in-complexity
Code for "Complexity in Complexity: Understanding Visual Complexity Through Structure, Color, and Surprise". CogSci, 2025 & ICLR Re-Align Workshop, 2025.
https://github.com/sun-data/regridding
Numba-accelerated interpolation of NumPy n-dimensional arrays.
motila
Pipeline for analyzing microglial fine process motility from 4D/5D multi-photon imaging data
deepinv
DeepInverse: a PyTorch library for solving imaging inverse problems using deep learning
https://github.com/capjamesg/computer-vision-challenges
Test your knowledge of computer vision with these challenges.
https://github.com/fhooeaist/aistcv
OpenCV Wrapper for Java with Contribution Packages
pace_oci_toolkit
Google Earth Engine (GEE) JavaScript-based tools for working with NASA PACE OCI data
sgumlp
Pytorch implementation of the SGU-MLP Architecture (mostly) as described in the paper "Spatial Gated Multi-Layer Perceptron for Land Use and Land Cover Mapping".
hyperspectral_toolkit
Google Earth Engine (GEE) JavaScript-based tools for working with various hyperspectral datasets (e.g., AVIRIS, EMIT, Hyperion, PACE OCI)
sciview
sciview is a tool for visualization and interaction with ND image and mesh data
https://github.com/cgohlke/chebyfit
Fit exponential and harmonic functions using Chebyshev polynomials.
https://github.com/clesperanto/clic
GPU-accelerated Image Processing library for C++
speckcn2
:satellite: :cyclone: A platform to use speckle patterns to describe atmospheric turbulence
fluidimage
:sparkler: A libre Python framework for scientific treatments of large series of images (publish-only mirror)
https://github.com/abhimanyu911/plages-identification
An image processing approach to identify solar plages
https://github.com/alexkranias/photessera
Photessera is a Java-based video and image manipulation software that can allows users to create video and image mosaics, constructed out of a separate group of user-selected images. The software supports the following file types as input: MP4, MOV, PNG, JPG. As of now the software is only verified as functional on Windows devices. A video explanation of the functionality of the software can be found @ https://youtu.be/ftKO35jiCHQ
curved-text-alignment
A function that takes as input a cropped text line image, and outputs the dewarped image.
https://github.com/devidw/coverimagegenerator
Generate Cover Images for your blog articles
https://github.com/omigutin/img_ops
Is a minimal, device‑aware image ops library built on top of OpenCV and NumPy.
Colocalization
Colocalization metrics and distances for images or their sparse representations.
cornea-stretch-and-tonometer-capture-processing
Project Supervised by Professor Jean-Marc Allain on Cornea Stretch Extraction From Tonometer Captures
stm-cluster-heightzer
Stm cluster heights resizer (stm-cluster-heightzer) is a class that finds peaks of clusters (high bumps) in a scanning tunneling microscope (STM) image(data) and if necessary corrects the heights of the individual clusters to the surrounding surface.
https://github.com/ccmim/origami
MATLAB-based image analysis pipeline for extracting single-cell direction-variant shape features from fluorescence images of folding epithelial sheets.
mother-db-annotation-tools
This repository contains code for the MOTHER-DB.org specifically related to image segmentation and annotation work flows. MOTHER-DB is a database, meta-data archive and set of programs for annotating and storing ovary histology images from a wide range of species.
swelling_tablet_fronts_d_k_from_mri_t2_or_img
Tool for calculating swelling tablet eroding front's diffusion rate D and the rate of the swelling k from time series of either T2-maps or MRI images in FDF or Text Image format. (Python 3)
mri_k-space-derived_details_edges
k-space based details/edges detection in MRI images with optional k-space based denoising and detail control (on the example of Agilent FID data). (Python 3)
microaligner
Image registration (alignment) software for large microscopy images
slicer
Multi-platform, free open source software for visualization and image computing.
teaching
Teaching Materials for Dr. Waleed A. Yousef
exploreasl-gui
A user interface for the analysis of arterial spin labeling (ASL) images. Documentation can be found at: https://mauricepasternak.github.io/ExploreASL-GUI-Docs/latest
k-space_wght_msk_for_mri_denoising
k-space weighting and masking for denoising of MRI image without blurring or losing contrast, as well as for brightening of the objects in the image with simultaneous noise reduction (on the example of Agilent FID data). (Python 3)
genai-pod
GenAI is a command-line tool that streamlines image generation and webshop integration. By leveraging ChatGPT (via Selenium automation), it can programmatically create images, apply background removal, perform upscaling and finally publish these designs on popular print-on-demand platforms such as Spreadshirt and Redbubble.
pyhistology
Python package that uses colorspace-based segmentation to analyze histopathology images.
image-crop-analysis
Code for reproducing our analysis in the paper titled: Image Cropping on Twitter: Fairness Metrics, their Limitations, and the Importance of Representation, Design, and Agency
osparc-iseg
The Medical Image Segmentation Tool Set (iSEG) is a fully integrated segmentation (including pre- and postprocessing) toolbox for the efficient, fast, and flexible generation of anatomical models from various types of imaging data
packages_gee
A repository of miscellaneous JavaScript-based packages for Google Earth Engine (GEE)
confocal_z-stack_analysis
Imaging experiments in Biology often involve the acquisition of confocal z-stack images to quantify fluorescent signal in a biological sample. These z-stacks are usually analyzed using open-source programs such as FIJI, which are notoriously frustrating to work with, and do not facility intuitive high-throughput analysis of many images at once. Manual image analysis is labor-intensive, time-consuming, and prone to human error. I compiled two notebooks to streamline two of the most commonly performed tasks in the analysis of confocal z-stack images: the generation of "pretty" maximum projections, and the analysis of pixel values/ fluorescence from sum projections.
https://github.com/amilworks/ece178
My unhinged TA Notes for Digital Image and Video Processing
https://github.com/amilworks/3d-xception
Facebook DeepFake Detection Challenge: PyTorch 3D Xception Network for Video Classification
https://github.com/ashrithsagar/signal_imageprocessing-lab
Signal & Image Processing Lab, MATLAB
https://github.com/beatawereszczynska/t1wir_to_t1wsr
Simulating T1-weighted saturation recovery MRI images for arbitrary values of TR from a set of T1-weighted inversion recovery MRI images. (Python 3)
afm-analysis-pipeline
An open-source project that offers an environment in which to construct atomic force microscopy (AFM) image data processing pipelines.
https://github.com/beatawereszczynska/tiandte_wish
Calculating theoretical MRI images with both TI (T1-weighting) and TE (T2-weighting) of choice, from separate T1-weighted and T2-weighted sets of images. (Python 3)
https://github.com/beatawereszczynska/ti_te_wish
Simulating T1- and T2-weighted MRI images with arbitrary values of TI or TE, respectively. (Python 3)
stereo_vision_core
Stereo Vision Core accelerator is a real-time stream processing architecture that calculates the disparity map of stereo images. The accelerator is available as an RTL description using VHDL, which is fully parametrizable and synthetizable for FPGA or ASIC.
stabilo
🌀 Stabilo is a Python package for stabilizing video frames or object trajectories using advanced transformation techniques. It supports user-defined masks to exclude specific areas, making it ideal for dynamic scenes with moving objects. Unlike traditional stabilization, it stabilizes content relative to a chosen reference frame.
paperclipinspection
Analyzing Paper Clips Using Deep Learning and Computer Vision Techniques 📎
hogpp
Fast computation of rectangular histogram of oriented gradients (R-HOG) features using integral histogram
lsmquant
A pipeline for processing and analysis of light-sheet microscopy images.
drugsens
drugsens is a R-package that allows users to automatically analyze QuPath™ output data from imaging analysis
https://github.com/amirzenoozi/webcam-motion-detection
Motion Detection With OpenCV and Python Based on Webcam Input
https://github.com/beatawereszczynska/k-space_masking_for_mri_denoising
Graduate k-space masking for MRI image denoising and blurring (on the example of Agilent FID data). (Python 3)
sandi
Sediment ANalysis and Delineation through Images. A free and open-source software to process particles from high-resolution underwater images and to analyze gravels from laboratory images. Designed for contour detection, shape characterization and size measurement. SANDI is intended to become a collaborative project.
deeptrack
DeepTrack2 is a modular Python library for generating, manipulating, and analyzing image data pipelines for machine learning and experimental imaging.
https://github.com/bchao1/awesome-image-rectification
📝 A curated list of image rectification papers.
https://github.com/bchao1/high-dynamic-range-imaging
📷 High Dynamic Range Imaging with Debevec '97 Algorithm.
https://github.com/aryanvbw/exif
ExifTool is a powerful command-line tool that can be used to extract and edit metadata in a wide range of media files, including images, audio, and video. Metadata is information that is stored within a file that describes the file’s content or other attributes.
https://github.com/catarinaacsilva/medical-image-processing
Detection of blood acanthocytes through image processing and pattern recognition techniques