https://github.com/baggepinnen/dynamicaxiswarping.jl
Dynamic Time Warping (DTW) and related algorithms in Julia, at Julia speeds
covid-19-the-economist-global-excess-deaths-model
The Economist's model to estimate excess deaths to the covid-19 pandemic
cfbfastr
An R package to quickly obtain clean and tidy college football play by play data
atb-calc
Python files and Jupyter notebooks for processing the Annual Technology Baseline (ATB) electricity data and determining LCOE and other metrics.
https://github.com/brucewlee/lingfeat
[EMNLP 2021] LingFeat - A Comprehensive Linguistic Features Extraction ToolKit for Readability Assessment
https://github.com/doi-usgs/lake-temp-timeseries
A gif of surface temperatures for 185,549 lakes
mpb
MIT Photonic-Bands: computation of photonic band structures in periodic media
https://github.com/cf-convention/cf-convention.github.io
sources for website cf-conventions.org
https://github.com/google-research/skai
SKAI is a machine learning based tool for performing automatic building damage assessments on aerial imagery of disaster sites.
https://github.com/broadinstitute/viral-pipelines
viral-ngs: complete pipelines
ReviewR
A Shiny tool for performing manual review of electronic medical records
scout
A tool for estimating the future energy use, carbon emissions, and capital and operating cost impacts of energy efficiency and demand flexibility technologies in the U.S. residential and commercial building sectors.
openentrance
Definitions of common terms (variables, regions, etc.) for the openENTRANCE project
epatada
This R package can be used to compile and evaluate Water Quality Portal (WQP) data for samples collected from surface water monitoring sites on streams and lakes. It can be used to create applications that support water quality programs and help states, tribes, and other stakeholders efficiently analyze the data.
https://github.com/bluebrain/highfive
HighFive - Header-only C++ HDF5 interface
https://github.com/cumbof/honto
A novel method for assessing and measuring homophily in networks
https://github.com/cbg-ethz/scdef
Deep exponential families for single-cell data.
https://github.com/altunenes/sorceress
Coding optical illusions in Python and JavaScript
https://github.com/bioconductor/biostrings
Efficient manipulation of biological strings
fancyimpute
Multivariate imputation and matrix completion algorithms implemented in Python
https://github.com/chrisgrieser/nvim-rip-substitute
Search and replace in the current buffer with incremental preview, a convenient UI, and modern regex syntax.
https://github.com/codegouvfr/eleventy-dsfr
Template pour la création d'un site utilisant le système de design de l'État avec Eleventy.
https://github.com/benmaier/binpacking
Distribution of weighted items to bins (either a fixed number of bins or a fixed number of volume per bin). Data may be in form of list, dictionary, list of tuples or csv-file.
https://github.com/byuflowlab/vortexlattice.jl
A Comprehensive Julia implementation of the Vortex Lattice Method
https://github.com/sous-chefs/fail2ban
Development repository for the fail2ban cookbook
https://github.com/ika-rwth-aachen/betterosi
betterosi - a python library for reading and writing open-simulation-interface files using betterproto2
ir
Tidy data structure for infrared spectra and functions to handle and preprocess them.
optimized-spectral-superresolution
Spectral Super-Resolution with Optimized Bands
load_forecasting
Forecasting electric power load of Delhi using ARIMA, RNN, LSTM, and GRU models
https://github.com/compvis/depth-fm
[AAAI 2025] DepthFM: Fast Monocular Depth Estimation with Flow Matching
pims
Python Image Sequence: Load video and sequential images in many formats with a simple, consistent interface.
https://github.com/alleninstitute/visual_behavior_analysis
Python package for analyzing behavioral data for Brain Observatory: Visual Behavior
https://github.com/broadinstitute/gtex-pipeline
GTEx & TOPMed data production and analysis pipelines
magics
Plotting package to visualise meteorological data in GRIB, NetCDF, BUFR and ODB format.
https://github.com/byuflowlab/snow.jl
Optimization framework for nonlinear, gradient-based constrained, sparse optimization problems.
https://github.com/biocomputingup/ensembletools
IDPEnsembleTools is a Python package designed to facilitate the loading, analysis, and comparison of multiple conformational ensembles of intrinsically disordered proteins (IDPs).
https://github.com/pmeal/beatmap
BET surface area analysis from adsorption data
grobid-superconductors
Grobid module for superconductor material and properties extraction
spectralcov-gp-mtgp
Gaussian Processes for Vegetation Parameter Estimation from Hyperspectral Data with Limited Ground Truth
neonUtilities
Utilities and scripts for working with NEON data. Currently: an R package with functions to join (stack) the month-by-site files in downloaded NEON data, to convert data to geoCSV format, and to download data from the API.
https://github.com/bioconductor/genomicranges
Representation and manipulation of genomic intervals
curare
Curare - A customizable and reproducible analysis pipeline for RNA-Seq experiments
https://github.com/google-research/arxiv-latex-cleaner
arXiv LaTeX Cleaner: Easily clean the LaTeX code of your paper to submit to arXiv
peoplesanspeople
Unity's privacy-preserving human-centric synthetic data generator
complexnet
Website for the R package 'complexNet' that generates and iterates complex networks based on heritable linking traits in agent-based simulations.
lixtools
Software tools for data collection and processing at the LiX beamline
earth2mip
Earth-2 Model Intercomparison Project (MIP) is a python framework that enables climate researchers and scientists to inter-compare AI models for weather and climate.
https://github.com/bigscience-workshop/biomedical
Tools for curating biomedical training data for large-scale language modeling
https://github.com/apertium/lttoolbox
Finite state compiler, processor and helper tools used by apertium
wiki-entity-summarization
This repository hosts a comprehensive suite for graph-based entity summarization dataset generating from user-selected Wikipedia pages. Utilizing a series of interconnected modules, it leverages Wikidata and Wikipedia dumps to construct a dataset, alongside auto-generated ground truths.
dfitspy
dfitspy: a dfits|fitsort implementation in python - Published in JOSS (2019)
https://github.com/althonos/gb-io.py
A Python interface to gb-io, a fast GenBank parser written in Rust.
