amep
The Active Matter Evaluation Package (AMEP) - a Python library for the analysis of particle-based and continuum simulation data of soft and active matter systems
zeek_anomaly_detector
A completely automated anomaly detector Zeek network flows files (conn.log).
https://github.com/ipc-lab/kaira
A PyTorch-based toolkit for simulating communication systems
architxt
ArchiTXT is an open source Python library that transforms unstructured text into structured, searchable, and AI-ready data. It enables automated database generation and seamless data integration.
ebisim
ebisim - a Python package for simulating the charge state distribution evolution in an EBIS/EBIT
elaspy
A discrete-event simulator of the emergency response process of electric and diesel ambulances.
msannika_csm_annotation
Calculates Intensities of Cross-linked Peptides from MS Annika CSMs.
thereminq-tensors
ThereminQ Tensors - Quant/AgentOPS - run diverse GPU / HPC enabled Quantum Jupyter notebooks; Shors' and QI derivatives in a WebUI
quantum-chem
A Python program that computes the electronic densities and binding energies for isolated neutral atoms from an orbital-free density functional scheme based on polymer self-consistent field theory.
pyhistology
Python package that uses colorspace-based segmentation to analyze histopathology images.
futurecoord
Model-based AI approach for network and service coordination leveraging uncertain traffic forecasts
ieeh-power-system-data-model
A hierarchical data model for the description of electrical power systems.
python-lab-automation-landscape
A catalog/overview of Python packages in the area of lab automation.
ferramentas_scielo_v2
Esse repositório é parte dos projetos desenvolvidos pelos membros do LABHDUFBA e tem como objetivo oferecer ferramentas de raspagem, organização e análise de artigos ciêntíficos publicados na plataforma Scielo.br.
automatedfreesurfer
interactive-learning-duo
Unlock Your Coding Potential: Explore, Learn, and Code with Our Interactive Python and SQL ChatBot!
https://github.com/czs108/microsoft-malware-classification
🔍 "2015 Microsoft Malware Classification Challenge" - Using machine learning to classify malware into different families based on Windows PE structures, disassembly scripts and machine code.
influence-model
A Python implementation of the influence model, a generative model that describes the interactions between networked Markov chains
peef
The Python Environment with Enhanced Feedback (PEEF) is an IDE Python Online that allows Students coding with Enhance Feedbacks. This IDE allows teachers to get the metrics of students' errors throw your exercises.
https://github.com/codingfisch/mriaug
Augment 3D images (e.g. MRIs) in PyTorch 🔥
listening-beyond-the-labels-v1
A scalable and non-invasive speech-based machine learning model for early Alzheimer's detection using mel-spectrograms and lightweight semi-supervised CNN with no transcription or neuroimaging needed.
https://github.com/babinyurii/recan_gui
A web tool for recombination events analysis in viral genomes. Django based version of recan
mfte
MFTE (Multi Feature Tagger of English) Python is the Python version based on Le Foll's MFTE written in Perl. It is extended to include semantic tags from Biber (2006) and Biber et al. (1999), including other specific tags.
spectools
A collection of astronomical spectrum reduction and processing scripts.
latte
Latte: Cross-framework Python Package for Evaluation of Latent-based Generative Models
stanford-hypoglycemia-forecasting
A machine learning model for week-ahead hypoglycemia prediction from continuous glucose monitoring data.
2025-02-24-python-socsci-online
Reproducible analysis: Python for social scientists. The SSI workshop related to the Research Software Practices in the Social Sciences programme.
pytextureanalysis
PyTextureAnalysis is a Python package for analyzing the texture of images. It includes functions for calculating local orientation, degree of coherence, and structure tensor of an image. This package is built using NumPy, SciPy and OpenCV.
https://github.com/cvxgrp/vgi
Value-gradient iteration for convex stochastic control
p2108-python
Python wrapper for U.S. Reference Software Implementation of Recommendation ITU-R P.2108
araucana-xai
Tree-based local explanations of machine learning model predictions
rafmetrics
Metrics for evaluating the performance and complexity of computer programs
mri_k-space-derived_details_edges
k-space based details/edges detection in MRI images with optional k-space based denoising and detail control (on the example of Agilent FID data). (Python 3)
yolov5-parts
Training of VOC2007(or T-LESS) dataset using YOLOv5 (including improved version)
https://github.com/tom-mohr/clevertable
Consistent, intelligent transformation of text-based tabular data into numerical data.
swelling_tablet_fronts_d_k_from_mri_t2_or_img
Tool for calculating swelling tablet eroding front's diffusion rate D and the rate of the swelling k from time series of either T2-maps or MRI images in FDF or Text Image format. (Python 3)
https://github.com/adamouization/asp-timetable
:calendar: ASP-Timetable is an AI logic program implemented in a declarative manner using ASP and Clingo (2017)
reviewer-recommender
Reviewer Recommender is a Python-based application designed to run different algorithms on a specified GitHub project. The algorithms include RevFinder, ChRev, TurnoverRec, and Sofia. The application fetches data from GitHub using a separate Github-crawler and stores it locally for processing. It also provides functionality for evaluating the algor
compiled-ess-point-data-sets
A compendium of compiled Earth System Science point data sets. Targets: analysis-ready data, compressed, with documented import steps, available in diversity of formats, under open data license, and with detailed instructions on how to use the data.
prob-conf-mat
Confusion matrices with uncertainty quantification, experiment aggregation and significance testing.
https://github.com/cusyio/datenanalyse-in-python
Kurs zur automatisierten Aufbereitung, Zusammenfassung und Erstellung von Diagrammen tabellarischer Daten mit Python.
https://github.com/cusyio/python-fuer-einsteiger
Kurs um in der Programmiersprache Python einfache Programme selbst erstellen und ausführen zu können.
https://github.com/dan-shields/rocketleagueirl
Rocket League comes to Real Life!
pytximport
Feature-rich Python implementation of the tximport package for gene count estimation.
cbmpy-metadraft
CBMPy Metadraft: a flexible and extensible genome-scale model reconstruction tool
model-guidance
Code for the paper: Studying How to Efficiently and Effectively Guide Models with Explanations. ICCV 2023.
medical-analysis-assistant
a web appplication to assist with heart disease prediction, skin cancer and tubercolosis detection also with a health chatbot.
https://github.com/alexisvassquez/juniper2.0
Conversational AI model and educational tool
qchecker
A library intended to identify semantically meaningful micro-antipatterns in student code
annodash
[JAMIA Open] A clinical terminology annotation dashboard created using Plotly Dash & the MIMIC-IV database.
https://github.com/a-herzog/queuesim
QueueSim is a Python package for discrete event stochastic simulation of queueing networks. For Kendall models the performance indicators can also be computed using Erlang and Allen Cunneen approximation formulas.
pyhdb
pyHDB - Ferramenta de auxílio metodológico para pesquisas na interface da Hemeroteca Digital Brasileira da Biblioteca Nacional. Desenvolvida por Eric Brasil (IHLM-UNILAB) como parte de pesquisa acadêmica da área de História Digital.
https://github.com/cicirello/python-github-action-template
A template repository for GitHub Actions implemented in Python
genai-pod
GenAI is a command-line tool that streamlines image generation and webshop integration. By leveraging ChatGPT (via Selenium automation), it can programmatically create images, apply background removal, perform upscaling and finally publish these designs on popular print-on-demand platforms such as Spreadshirt and Redbubble.
https://github.com/b612-asteroid-institute/precovery
Fast precovery of small body observations at scale
mysql-mcp-server
A comprehensive Model Context Protocol (MCP) server for MySQL databases with 200+ tools for advanced database management, diagnostics, performance analysis, security auditing, and AI-powered database interactions.
skltest
Python library to compare the performance obtained by models available in Scikit-learn to solve regression and classification problems. It is possible to evaluate the influence of successive resampling and optimize the hyperparameters through a K-fold cross-validation holdout.
https://github.com/dineshpinto/data-aggregator
A high performance solution to analysing millions of incoming data points using JIT, vectorisation and C arrays.
https://github.com/crim-ca/blockchain
Explore extensions and applicability of Blockchain technology to guarantee integrity and traceability of private data.
