dbdicom-package • Rank 4.8 • Science 49%

Read and write to DICOM database

rerddap • Rank 17.8 • Science 36%

R client for working with ERDDAP servers

@stdlib/utils-pick • Rank 9.8 • Science 44%

Return a partial object copy containing only specified keys.

archriscv-packages • Rank 9.8 • Science 44%

Modified Arch Linux packages for archriscv

cryosphere-links • Rank 7.8 • Science 46%

This is a link list with awesome data, models, and tools around the cryosphere.

pygbif • Rank 17.8 • Science 36%

GBIF Python client

rapiclient • Rank 17.8 • Science 36%

Dynamic Open API (Swagger) Client for R

mosfit • Rank 12.8 • Science 41%

Modular Open Source Fitter for Transients

@stdlib/assert-is-ndarray-like • Rank 9.8 • Science 44%

Test if a value is ndarray-like.

articles • Rank 9.8 • Science 44%

thoughts on programming

https://github.com/aureme/aucome • Rank 7.8 • Science 46%

Automatic Comparison of Metabolism

moldrug • Rank 9.8 • Science 44%

moldrug (AKA mouse) is a Python package for drug-oriented optimization on the chemical space ​

@stdlib/stats-base-dists-chisquare-pdf • Rank 9.8 • Science 44%

Chi-squared distribution probability density function (PDF).

@stdlib/string-utf16-to-utf8-array • Rank 9.8 • Science 44%

Convert a UTF-16 encoded string to an array of integers using UTF-8 encoding.

@stdlib/stats-base-dists-binomial-pmf • Rank 9.8 • Science 44%

Binomial distribution probability mass function (PMF).

@stdlib/random-base-randn • Rank 9.8 • Science 44%

Standard normal pseudorandom numbers.

@stdlib/stats-base-dists-chisquare-median • Rank 9.8 • Science 44%

Chi-squared distribution median.

@stdlib/array-base-filled-by • Rank 9.7 • Science 44%

Create a filled generic array according to a provided callback function.

@stdlib/stats-base-dists-poisson-skewness • Rank 9.7 • Science 44%

Poisson distribution skewness.

pysatcdaac • Rank 7.7 • Science 46%

pysat support for CDAAC instruments

gdsfmt • Rank 17.7 • Science 36%

R Interface to CoreArray Genomic Data Structure (GDS) Files (Development version only)

json-to-usv • Rank 9.7 • Science 44%

JavaScript Object Notation (JSON) to Unicode Separated Values (USV) Rust crate

bnlearn • Rank 17.7 • Science 36%

Python package for Causal Discovery by learning the graphical structure of Bayesian networks. Structure Learning, Parameter Learning, Inferences, Sampling methods.

https://github.com/bacalhau-project/bacalhau • Rank 17.7 • Science 36%

Community-driven, simple, yet powerful framework for fast, cost-effective distributed Compute over Data.

@stdlib/assert-is-nonnegative-integer-array • Rank 9.7 • Science 44%

Test if a value is an array-like object containing only nonnegative integers.

revisit-severson-et-al • Rank 4.7 • Science 49%

Repository for the paper "Statistical learning for accurate and interpretable battery lifetime prediction"

https://github.com/firefly-cpp/uarmsolver • Rank 4.7 • Science 49%

universal Association Rule Mining Solver

neurodatapub • Rank 4.7 • Science 49%

NeuroDataPub is an open-source neuroimaging dataset publication tool built on top of Datalad that helps NCCR-Synapsy members in the task of managing their dataset with Datalad and referencing them to the NCCR-SYNAPSY GitHub organization.

ariadne • Rank 27.7 • Science 26%

Python library for implementing GraphQL servers using schema-first approach.

lazyprophet • Rank 9.7 • Science 44%

Time Series Forecasting with LightGBM

@stdlib/proxy • Rank 9.7 • Science 44%

Proxy.

https://github.com/jcmcnch/easv-pipeline-for-515y-926r • Rank 4.7 • Science 49%

This is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools

pysbf2 • Rank 9.7 • Science 44%

Python library for parsing and generating Septentrio SBF GPS/GNSS protocol messages.

@stdlib/random-base-rayleigh • Rank 9.7 • Science 44%

Rayleigh distributed pseudorandom numbers.

@stdlib/stats-base-dists-negative-binomial-pmf • Rank 9.7 • Science 44%

Negative binomial distribution probability mass function (PMF).

cyipopt • Rank 17.7 • Science 36%

Cython interface for the interior point optimzer IPOPT

@stdlib/assert-is-method-in • Rank 9.7 • Science 44%

Test if an object has a specified method name, either own or inherited.

gsDesign • Rank 17.7 • Science 36%

Group sequential design for clinical trials

AgentPy — Peer-reviewed • Rank 7.7 • Science 46%

AgentPy: A package for agent-based modeling in Python - Published in JOSS (2021)

rb • Rank 27.7 • Science 26%

Routing and connection management for Redis in Python

@stdlib/string-pascalcase • Rank 9.7 • Science 44%

Convert a string to Pascal case.

nmrformd • Rank 7.7 • Science 46%

NMRforMD is a python script for the calculation of NMR relaxation time T1 and T2 from molecular dynamics trajectory file.

biosnicar-py • Rank 4.7 • Science 49%

Snow and ice albedo modelling in Python

scanneo2 • Rank 4.7 • Science 49%

Snakemake-based computational workflow for neoantigen prediction from diverse sources

covidcast • Rank 17.7 • Science 36%

R and Python packages supporting Delphi's COVIDcast effort.

https://github.com/activitywatch/aw-server-rust • Rank 27.7 • Science 26%

High-performance implementation of the ActivityWatch server, written in Rust

banditpam • Rank 17.7 • Science 36%

BanditPAM C++ implementation and Python package

@stdlib/ndarray-base-ind • Rank 9.7 • Science 44%

Return an index given an index mode.

lux-design-s1 • Rank 9.7 • Science 44%

Home to the design and engine of the @Lux-AI-Challenge Season 1, hosted on @kaggle

TACO • Rank 7.7 • Science 46%

🌮 Trash Annotations in Context Dataset Toolkit

tg-autoposter • Rank 9.7 • Science 44%

Telegram Bot for reposting from VK

unsupervised_analysis • Rank 4.7 • Science 49%

A general purpose Snakemake workflow and MrBiomics module to perform unsupervised analyses (dimensionality reduction & cluster analysis) and visualizations of high-dimensional data.

https://github.com/ibm/lale • Rank 17.7 • Science 36%

Library for Semi-Automated Data Science

BayesSpace • Rank 17.7 • Science 36%

Bayesian model for clustering and enhancing the resolution of spatial gene expression experiments.

mdproptools • Rank 7.7 • Science 46%

A Python package for LAMMPS analysis tools

molsysmt • Rank 4.7 • Science 49%

Open source library to work with molecular systems

DiffEqCallbacks • Rank 17.6 • Science 36%

A library of useful callbacks for hybrid scientific machine learning (SciML) with augmented differential equation solvers

phylophlan • Rank 14.6 • Science 39%

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes

cflib • Rank 17.6 • Science 36%

Python library to communicate with Crazyflie

gepa • Rank 4.6 • Science 49%

This repository contains the code for the EPA U.S. gridded methane greenhouse gas inventory (gridded GHGI)

FAIRshare • Rank 2.6 • Science 51%

Simplifying the curation and sharing of biomedical research data and software according to applicable FAIR guidelines

grid2op • Rank 17.6 • Science 36%

Grid2Op a testbed platform to model sequential decision making in power systems.

Cyclops • Rank 17.6 • Science 36%

Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

@stdlib/assert-is-unity-probability-array • Rank 9.6 • Science 44%

Test if a value is an array of probabilities that sum to one.

@stdlib/ndarray-base-assert-is-index-mode • Rank 9.6 • Science 44%

Test if an input value is a supported ndarray index mode.

ChemmineOB • Rank 17.6 • Science 36%

OpenBabel wrapper package for R

@stdlib/error-to-json • Rank 9.6 • Science 44%

Return a JSON representation of an error object.

pydra • Rank 17.6 • Science 36%

Pydra Dataflow Engine

delineator • Rank 4.6 • Science 49%

Fast, accurate watershed delineation using hybrid vector- and raster-based methods and data from MERIT-Hydro

@stdlib/array-base-assert-contains • Rank 9.6 • Science 44%

Test if an array contains a provided search value.

@stdlib/ndarray-base-assert-is-buffer-length-compatible • Rank 9.6 • Science 44%

Determine if a buffer length is compatible with provided ndarray meta data.

https://github.com/calebbell/chemicals • Rank 17.6 • Science 36%

chemicals: Chemical database of Chemical Engineering Design Library (ChEDL)

pysatmadrigal • Rank 7.6 • Science 46%

Madrigal instrument support for the pysat ecosystem

pypsa-pl • Rank 4.6 • Science 49%

PyPSA-PL: optimisation model of the Polish energy system

PyBioPAX — Peer-reviewed • Rank 4.6 • Science 49%

PyBioPAX: biological pathway exchange in Python - Published in JOSS (2022)

rmsd • Rank 17.6 • Science 36%

Calculate Root-mean-square deviation (RMSD) of two molecules, using rotation, in xyz or pdb format

com.wallbrew/brew-bot • Rank 9.6 • Science 44%

A quick, dirty way to get randomized beer recipes

karabo-pipeline • Rank 7.6 • Science 46%

The Karabo Pipeline can be used as Digital Twin for SKA

@stdlib/ndarray-base-dtype-str2enum • Rank 9.6 • Science 44%

Return the enumeration constant associated with an ndarray data type string.

https://github.com/conda/grayskull • Rank 17.6 • Science 36%

Grayskull :skull: - Recipe generator for Conda

@stdlib/ndarray-base-assert-is-order • Rank 9.6 • Science 44%

Test if an input value is an ndarray order.

@stdlib/stats-base-stdev • Rank 9.6 • Science 44%

Calculate the standard deviation of a strided array.

https://github.com/bitfoundation/bitplatform • Rank 27.6 • Science 26%

Build all of your apps using what you already know and love ❤️

@stdlib/ndarray-base-wrap-index • Rank 9.6 • Science 44%

Wrap an index on the interval [0,max].

greenexp_r • Rank 4.6 • Science 49%

This is a R toolkit and developer version package to estimate multidimensional aspects of greenness and nature exposure, such as availability, accessibility and visibility using various geospatial data and models

https://github.com/althonos/torch-treecrf • Rank 4.6 • Science 49%

A PyTorch implementation of Tree-structured Conditional Random Fields.

@stdlib/assert-is-integer-array • Rank 9.6 • Science 44%

Test if a value is an array-like object containing only integers.

https://github.com/algebraicjulia/petri.jl • Rank 7.6 • Science 46%

A Petri net modeling framework for the Julia programming language

@stdlib/string-uppercase • Rank 9.6 • Science 44%

Convert a string to uppercase.

ogr • Rank 17.5 • Science 36%

One Git library to Rule -- one API for many git forges

kmerdb • Rank 9.5 • Science 44%

Python CLI for alignment-free genomics.

RTCGAToolbox • Rank 17.5 • Science 36%

qcengine • Rank 17.5 • Science 36%

Quantum chemistry program executor and IO standardizer (QCSchema).

metR • Rank 17.5 • Science 36%

Tools for Easier Analysis of Meteorological Fields

napari-feature-classifier • Rank 9.5 • Science 44%

dfvue • Rank 4.5 • Science 49%

A minimal GUI for a quick view of csv files

stwfsapy • Rank 9.5 • Science 44%

Python reimplementation of stwfsapy.

usv-to-json • Rank 9.5 • Science 44%

Unicode Separated Values (USV) to JavaScript Object Notation (JSON) Rust crate

continuedfractions • Rank 9.5 • Science 44%

Object-oriented continued fractions with Python.

syncopy • Rank 4.5 • Science 49%

Systems Neuroscience Computing in Python: user-friendly analysis of large-scale electrophysiology data