https://github.com/alan-turing-institute/reg-handbook
A way of working guide for the Research Engineering Group at The Alan Turing Institute
python-eofdm-precursors
Flight data analysis to detect features relevant to the continual improvement of safety.
os_strategy_nhmw
Open Science in Museums - Strategy of the "Naturhistorisches Museum Wien"
https://github.com/cms-patatrack/pixeltrack-standalone
Standalone Patatrack pixel tracking
@stdlib/blas-ext-base-dasumpw
Calculate the sum of absolute values (L1 norm) of double-precision floating-point strided array elements using pairwise summation.
https://github.com/magneticparticleimaging/mpimeasurements.jl
Julia package for performing MPI measurements
https://github.com/catalyst-cooperative/cheshire
A template repository to make setting up new Python projects easier and more uniform.
https://github.com/dasch-swiss/dsp-js-lib
JavaScript library that handles API requests to DSP / Knora API
riboseed
pipeline for using ribosomal flanking regions to improve bacterial genome assembly
https://github.com/cqcl/portgraph
Directed graph with first-level ports in Rust.
https://github.com/mverleg/pyjson_tricks
Extra features for Python's JSON: comments, order, numpy, pandas, datetimes, and many more! Simple but customizable.
https://github.com/digitalearthafrica/config
Config files for datacube and associated applications
https://github.com/broadinstitute/ichorcna
Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.
https://github.com/awslabs/aws-c-http
C99 implementation of the HTTP/1.1 and HTTP/2 specifications
https://github.com/chaoss/wg-metrics-development
CHAOSS Common Metrics Working Group
https://github.com/cytoscape/cytoscape-gui-distribution
Cytoscape 3 desktop version.
https://github.com/dahnj/h3-pandas
Integration of H3 with GeoPandas and Pandas
skpr
Generates and evaluates D, I, A, Alias, E, T, G, and custom optimal designs. Supports generation and evaluation of mixture and split/split-split/N-split plot designs. Includes parametric and Monte Carlo power evaluation functions. Provides a framework to evaluate power using functions provided in other packages or written by the user.
https://github.com/llnl/callflow
Visualization tool for analyzing call trees and graphs
https://github.com/chrisgrieser/nvim-lsp-endhints
Display LSP inlay hints at the end of the line, rather than within the line.
peaksegjoint
Supervised segmentation for jointly finding peaks in several ChIP-seq samples
digitalcellsorter
Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:
https://github.com/acdh-oeaw/viecpro-backend-devops
Deployment and development repository for the VieCPro APIS instance.
insane
An Interactive Web Application for Quality Control and Analysis of Insulin Secretion from Pancreatic Beta Cells.
https://github.com/alpaka-group/cupla
C++ User interface for the Platform independent Library Alpaka :arrows_clockwise:
https://github.com/alleninstitute/abc_atlas_access
Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas
storm-surge
Soontiens, N., Allen, S., Latornell, D., Le Souef, K., Machuca, I., Paquin, J.-P., Lu, Y., Thompson, K., Korabel, V. (2015). Storm surges in the Strait of Georgia simulated with a regional model. Atmosphere-Ocean, 54: 1-21 (2016).
https://github.com/clima/griddingmachine.jl
Functions to read gridded data so as to feed Clima Land model
appdirs
A small Python module for determining appropriate platform-specific dirs, e.g. a "user data dir".
https://github.com/futureverse/future.batchtools
:rocket: R package future.batchtools: A Future API for Parallel and Distributed Processing using batchtools
https://github.com/bonsai-rx/machinelearning-examples
Example workflows, datasets, and demos for the Bonsai machine learning package
archive
R bindings to libarchive, supporting a large variety of archive formats
https://github.com/bhklab/genefu
R package providing various functions relevant for gene expression analysis with emphasis on breast cancer.
tinytest
A lightweight, no-dependency, but full-featured package for unit testing in R
https://github.com/bytedance/mvdream-threestudio
3D generation code for MVDream
rfishbc
This package helps fisheries scientists collect growth data from calcified structures and back-calculate estimated lengths at previous ages. The package is intended to replace much of the functionality provided by the now out-dated fishBC software.
SalishSeaNowcast
Python package associated with running the SalishSeaCast NEMO and other ocean models in near-real-time to produce daily nowcasts/forecasts
https://github.com/energyquantified/eq-python-client
Python library for Montel EQ's Time Series API.
flexmeasures
The intelligent & developer-friendly EMS to support real-time energy flexibility apps, rapidly and scalable.
EnvStats
EnvStats — Package for Environmental Statistics, Including US EPA Guidance. Homepage: http://www.probstatinfo.com