Updated 10 months ago

fs • Rank 30.7 • Science 36%

Provide cross platform file operations based on libuv.

Updated 10 months ago

singa • Rank 12.7 • Science 54%

a distributed deep learning platform

Updated 10 months ago

hyperopt • Rank 30.7 • Science 36%

Distributed Asynchronous Hyperparameter Optimization in Python

Updated 10 months ago

maude • Rank 9.7 • Science 57%

Language bindings for Maude

Updated 10 months ago

https://github.com/cma-es/moarchiving • Rank 7.7 • Science 59%

Multiobjective nondominated archive classes with up to four objectives

Updated 10 months ago

coverm • Rank 17.7 • Science 49%

Read alignment statistics for metagenomics

Scientific Software
Updated 10 months ago

HODLRlib — Peer-reviewed • Rank 7.7 • Science 59%

HODLRlib: A Library for Hierarchical Matrices - Published in JOSS (2019)

Scientific Software · Peer-reviewed
Updated 10 months ago

itkwidgets • Rank 17.7 • Science 49%

An elegant Python interface for visualization on the web platform to interactively generate insights into multidimensional images, point sets, and geometry.

Updated 10 months ago

https://github.com/common-workflow-language/cwlviewer • Rank 7.7 • Science 59%

A web application to view and share Common Workflow Language workflows

Updated 10 months ago

discord.py • Rank 30.7 • Science 36%

An API wrapper for Discord written in Python.

Updated 10 months ago

ggtreeExtra • Rank 17.7 • Science 49%

:lemon: Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”

Updated 10 months ago

TopoPlots • Rank 7.7 • Science 59%

Makie topo plot recipes, for neuro-science, geo plots and anyone needing surface plots from unstructured data

Updated 10 months ago

lc0 • Rank 12.7 • Science 54%

Open source neural network chess engine with GPU acceleration and broad hardware support.

Updated 10 months ago

mapiso • Rank 4.7 • Science 62%

Transformation of regularly spaced grids into contour polygons

Updated 10 months ago

https://github.com/alexandrovlab/sigprofilertopography • Rank 9.7 • Science 57%

SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA replication, and DNA transcription on the activities of different mutational processes. SigProfilerTopography elucidates the unique topographical characteristics of mutational signatures.

Updated 10 months ago

yegor256/cam • Rank 12.6 • Science 54%

Classes and Metriсs (CaM): a dataset of Java classes from public open-source GitHub repositories

Updated 10 months ago

agentlego • Rank 12.6 • Science 54%

Enhance LLM agents with rich tool APIs

Updated 10 months ago

eurocrops • Rank 7.6 • Science 59%

The official repository for the EuroCrops dataset.

Updated 10 months ago

embomicrocom • Rank 2.6 • Science 64%

Metabolic modeling tutorial for EMBO practical course: Metabolite and species dynamics in microbial communities 2022

Updated 10 months ago

pyrams • Rank 2.6 • Science 64%

A set of tools for working with RAMS model output data

Updated 10 months ago

shardedstore • Rank 2.6 • Science 64%

Provides a sharded Zarr store

Updated 10 months ago

nolds • Rank 17.6 • Science 49%

Nonlinear measures for dynamical systems (based on one-dimensional time series)

Updated 10 months ago

devtools • Rank 30.6 • Science 36%

Tools to make an R developer's life easier

Updated 10 months ago

2020-03-09-python-workshop • Rank 4.6 • Science 62%

Workshop page for the 2020 CPA Python Workshop

Updated 10 months ago

morphapi • Rank 12.6 • Science 54%

A Python package to download neuronal morphologies

Updated 10 months ago

SingleR • Rank 20.6 • Science 46%

Clone of the Bioconductor repository for the SingleR package.

Updated 10 months ago

training.artemis.rds • Rank 4.6 • Science 62%

Research Data Storage and the Data Transfer Queue

Updated 10 months ago

imbalanced-learn • Rank 30.6 • Science 36%

A Python Package to Tackle the Curse of Imbalanced Datasets in Machine Learning

Updated 10 months ago

cuda-quantum • Rank 20.6 • Science 46%

C++ and Python support for the CUDA Quantum programming model for heterogeneous quantum-classical workflows

Updated 10 months ago

cna • Rank 12.6 • Science 54%

Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-cell datasets.

Updated 10 months ago

nismod-snail • Rank 12.6 • Science 54%

spatial networks impact assessment library 🐌

Updated 10 months ago

conan • Rank 30.5 • Science 36%

Conan - The open-source C and C++ package manager

Updated 10 months ago

whoi-hab-hub • Rank 4.5 • Science 62%

Harmful Algal Bloom data API and map project

Updated 10 months ago

composable-kernel • Rank 12.5 • Science 54%

Composable Kernel: Performance Portable Programming Model for Machine Learning Tensor Operators

Updated 10 months ago

nlopt • Rank 12.5 • Science 54%

library for nonlinear optimization, wrapping many algorithms for global and local, constrained or unconstrained, optimization

Updated 10 months ago

pymaro • Rank 15.5 • Science 51%

Multi-Agent Resource Optimization (MARO) platform is an instance of Reinforcement Learning as a Service (RaaS) for real-world resource optimization problems.

Updated 10 months ago

diffsims • Rank 7.5 • Science 59%

An open-source Python library providing utilities for simulating diffraction

Updated 10 months ago

cloudknot • Rank 12.5 • Science 54%

A python library to run your existing code on AWS Batch

Updated 10 months ago

py-torchbenchmark • Rank 12.5 • Science 54%

TorchBench is a collection of open source benchmarks used to evaluate PyTorch performance.

Updated 10 months ago

igor • Rank 9.5 • Science 57%

R package to extract information from the Intergovernmental Organizations ('IGO') Database , version 3, provided by the Correlates of War Project https://correlatesofwar.org/

Updated 10 months ago

nucml • Rank 7.4 • Science 59%

End-to-end python-based supervised machine learning pipeline for ML-augmented nuclear data evaluation.

Updated 10 months ago

BlueCarbon • Rank 9.4 • Science 57%

Estimation of organic carbon stocks and sequestration rates from soil/sediment cores from blue carbon ecosystems

Updated 10 months ago

opensk • Rank 22.4 • Science 44%

OpenSK is an open-source implementation for security keys written in Rust that supports both FIDO U2F and FIDO2 standards.

Updated 10 months ago

https://github.com/dotnet/interactive • Rank 30.4 • Science 36%

.NET Interactive combines the power of .NET with many other languages to create notebooks, REPLs, and embedded coding experiences. Share code, explore data, write, and learn across your apps in ways you couldn't before.

Updated 10 months ago

bpeasy • Rank 12.4 • Science 54%

Fast bare-bones BPE for modern tokenizer training

Updated 10 months ago

dpv • Rank 7.4 • Science 59%

Data Privacy Vocabularies and Controls CG (DPVCG)

Updated 10 months ago

scibasic • Rank 17.4 • Science 49%

sciBASIC# is a kind of dialect language which is derive from the native VB.NET language, and written for the data scientist.

Updated 10 months ago

mapserver • Rank 12.4 • Science 54%

Source code of the MapServer project. Please submit pull requests to the 'main' branch.

Updated 10 months ago

scdblfinder • Rank 7.4 • Science 59%

Methods for detecting doublets in single-cell sequencing data

Updated 10 months ago

vision_transformers_explained • Rank 4.4 • Science 62%

This folder of code contains code and notebooks to supplement the "Vision Transformers Explained" series published on Towards Data Science written by Skylar Callis.

Updated 10 months ago

testthat • Rank 30.4 • Science 36%

An R 📦 to make testing 😀

Scientific Software
Updated 10 months ago

Philentropy — Peer-reviewed • Rank 17.4 • Science 49%

Philentropy: Information Theory and Distance Quantification with R - Published in JOSS (2018)

Updated 10 months ago

sombrero • Rank 4.4 • Science 62%

A next-generation conjugate gradient benchmark from computational particle physics

Updated 10 months ago

@stdlib/blas-ext-base-dsumpw • Rank 9.4 • Science 57%

Calculate the sum of double-precision floating-point strided array elements using pairwise summation.

Updated 10 months ago

libflatsurf • Rank 7.4 • Science 59%

Translation Surfaces in C++/Python

Updated 10 months ago

lcmm • Rank 17.4 • Science 49%

R package lcmm

Updated 10 months ago

poweRlaw • Rank 17.4 • Science 49%

This package implements both the discrete and continuous maximum likelihood estimators for fitting the power-law distribution to data. Additionally, a goodness-of-fit based approach is used to estimate the lower cutoff for the scaling region.

Scientific Software
Updated 10 months ago

idpflex — Peer-reviewed • Rank 7.4 • Science 59%

idpflex: Analysis of Intrinsically Disordered Proteins by Comparing Simulations to Small Angle Scattering Experiments - Published in JOSS (2018)

Mathematics
Scientific Software · Peer-reviewed
Updated 10 months ago

ib • Rank 7.3 • Science 59%

Updated 10 months ago

playwright • Rank 30.3 • Science 36%

Python version of the Playwright testing and automation library.

Updated 10 months ago

uwot • Rank 20.3 • Science 46%

An R package implementing the UMAP dimensionality reduction method.

Updated 10 months ago

pawflim • Rank 9.3 • Science 57%

Wavelet denoising of phasors.

Updated 10 months ago

https://github.com/antsx/antspy • Rank 20.3 • Science 46%

A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.

Updated 8 months ago

https://github.com/google-research/retvec • Rank 12.3 • Science 54%

RETVec is an efficient, multilingual, and adversarially-robust text vectorizer.

Updated 10 months ago

ads2inspire • Rank 7.3 • Science 59%

Replace ADS citations with the appropriate INSPIRE ones in latex and bibtex

Updated 10 months ago

urdfenvs • Rank 12.3 • Science 54%

URDF environments for gym

Updated 10 months ago

cam2bev • Rank 7.3 • Science 59%

TensorFlow Implementation for Computing a Semantically Segmented Bird's Eye View (BEV) Image Given the Images of Multiple Vehicle-Mounted Cameras.

Updated 10 months ago

mx-syngrid • Rank 2.3 • Science 64%

Synthetic Grid Creation for MATPOWER

Updated 10 months ago

eyepy • Rank 12.3 • Science 54%

A python package to read, analyse and visualize OCT and fundus data from various sources.

Updated 10 months ago

pypickle • Rank 12.3 • Science 54%

pypickle is for saving and loading files in pickle format.

Engineering (40%)
Updated 10 months ago

classy-classification • Rank 12.3 • Science 54%

This repository contains an easy and intuitive approach to few-shot classification using sentence-transformers or spaCy models, or zero-shot classification with Huggingface.

Updated 10 months ago

palmerpenguins • Rank 20.3 • Science 46%

A great intro dataset for data exploration & visualization (alternative to iris).

Updated 10 months ago

ParameterizedFunctions • Rank 12.3 • Science 54%

A simple domain-specific language (DSL) for defining differential equations for use in scientific machine learning (SciML) and other applications

Updated 10 months ago

mycosnp-nf • Rank 7.3 • Science 59%

MycoSNP: Whole Genome Sequencing Analysis of Fungal Isolates

Updated 10 months ago

revss • Rank 12.3 • Science 54%

Robust Estimation in Very Small Samples