deepparse
Deepparse is a state-of-the-art library for parsing multinational street addresses using deep learning
py-horned-owl
A library for Web Ontology Language in Python created using a bridge from horned-owl to python using PyO3.
pymbe
pyMBE provides tools to facilitate building up molecules with complex architectures in the Molecular Dynamics software ESPResSo. For an up-to-date API documention please check our website:
entrainment
☀️ Rule-Based Model of the 24h Light/Dark Cycle Entrainment Phenomenon
jupyterlabpymolpysnips
Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.
vuegen
VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications. Users simply provide a directory with output files and VueGen compiles them into a structured report.
https://github.com/afd-illinois/pyharm
Python tools for HARM simulation analysis
3pnn
Code and source data used in the article "3D printed biomimetic cochleae and machine learning co-modelling provides clinical informatics for cochlear implant patients" (Lei et al. Nature Communications, 2021). The code is used for modelling the relationship between electric field imaging (EFI) profiles and the electro-anatomical features of cochleae using a multilayer perceptron (MLP) artificial neural network (NN) model.
mysql-mcp-server
A comprehensive Model Context Protocol (MCP) server for MySQL databases with 200+ tools for advanced database management, diagnostics, performance analysis, security auditing, and AI-powered database interactions.
https://github.com/b612-asteroid-institute/precovery
Fast precovery of small body observations at scale
lorann
Approximate Nearest Neighbor search using reduced-rank regression, with extremely fast queries, tiny memory usage, and rapid indexing on modern vector embeddings.
https://github.com/amr-yasser226/deep-dive-python
A personal record of Python concepts I explore — from everyday features to advanced techniques. Includes examples, explanations, and deep dives into the language’s inner workings.
unitary
API library providing common operations for adding quantum behaviors to games.
deeplearningcrashcourse
"Deep Learning Crash Course" is a comprehensive and up-to-date guide that takes you from simple neural networks all the way to cutting-edge deep learning architectures-no advanced math and programming required, just a basic knowledge of programming.
https://github.com/fernandezfran/lithiation_protocol
Lithiation of amorphous silicon protocol
gempy
GemPy is an open-source, Python-based 3-D structural geological modeling software, which allows the implicit (i.e. automatic) creation of complex geological models from interface and orientation data. It also offers support for stochastic modeling to address parameter and model uncertainties.
https://github.com/aramis-lab/clinica_pipeline_noddi
NODDI pipeline used for [Wen et al., 2018]
https://github.com/adalkiran/distributed-inference
A project to demonstrate an approach to designing cross-language and distributed pipeline in deep learning/machine learning domain, using WebRTC and Redis Streams.
https://github.com/andrei-vataselu/data-science-snippets
🧰 Essential EDA and Data Cleaning Helpers for Any DataFrame This collection of functions is designed to accelerate exploratory data analysis (EDA), quickly surface data quality issues, and offer high-level insights into the structure and content of your dataset.
https://github.com/yutsuro/pytorch-time-series-classification
Simple model creation for time series classification in Pytorch
https://github.com/seixasgroup/carcara
Towards Explainable, Scalable, and Accurate Machine-Learned Interatomic Potentials
https://github.com/aaronjs99/colonet
CoLoNet: Collaborative Localization in Wireless Sensor Networks
https://github.com/adithya-s-k/fitosaur-run
Fitosaur Run: Jump to Stay Alive! 🏃♂️💥 Experience a fitness adventure as you control the dino with your real-life jumps in this Chrome Dino Run game with a twist! 🦖💪
https://github.com/adriamontoto/developing-tools
The Developing Tools project is a Python 🐍 package designed to enhance the development process by providing a collection of tools/utilities ⚒️ aimed at improving debugging, performance measurement, error handling, ...
https://github.com/ahmedmoustafa/auc-dsci1412-spring2024
AUC DSCI1412 Spring2024
https://github.com/aidinhamedi/python-color-print-v2
A simple and user friendly way to print colored text to the console.
https://github.com/aidinhamedi/python-cli-toolkit
This Python CLI Toolkit is a powerful tool for creating command-line interfaces (CLI) with Python. It provides a framework for defining commands, handling user input, and managing modules.
https://github.com/alcrene/smttask
Maintain an electronic lab book for computational research
https://github.com/alexkranias/triton_vs_cuda
Building Triton and CUDA kernels side-by-side to create a cuBLAS-performant GEMM kernel.
https://github.com/alleninstitute/aibs-informatics-aws-utils
Library of generic Python AWS utils used by the AIBS Informatics "Marmot" team
https://github.com/alondmnt/codon-usage
MATLAB package for codon usage bias and NGS analysis
url-shortner
URL Shortner is a simple yet powerful tool to generate short versions of urls to share them conveniently with others. It allows users to update the existing long urls without having to reshare a new short version of url with others. The application has been developed in Python & Angular.
https://github.com/alexisvassquez/juniper2.0
Conversational AI model and educational tool
https://github.com/amilworks/segmentation
Applies mask (NIFTI format) to volumetric image (TIFF)
heartpredict
HeartPredict is a Python library designed to analyze and predict heart failure outcomes using patient data.
stsci-package-template
A package template for STScI Open Source software projects
https://github.com/alvarocavalcante/airflow-parse-bench
Stop creating bad DAGs! Use this tool to measure and compare the parse time of your DAGs, identify bottlenecks, and optimize your Airflow environment for better performance.
brski-py
A "Bootstrapping Remote Secure Key Infrastructure" (BRSKI) Demonstrator in Python
local-python-code-protector
The Local Python Code Protector Script is a command-line tool designed to provide source code protection and secure code sharing for Python scripts. It allows developers to obfuscate their Python code. This script supports both Python source files (.py) and compiled Python files (.pyc), offering flexible options for code obfuscation and encryption.
shapespyer
The project provides Python tool-chain and shell scripts for molecular simulation workflows: preparation, running and analysing molecular dynamics (MD) simulations of bio- and organic soft condensed matter.
hybrid-pre-doc2vec-doc-relevance
Hybrid approach combining dictionary-based NER and doc2vec
modular-diffusion
Python library for designing and training your own Diffusion Models with PyTorch
qupid
Qupid (Quantitative PCR Interface to Delta-Delta-Ct) - a versatile web-application for swift Delta-Delta-Ct analysis of qPCR data
behavython
To be used in conjunction with Bonsai-RX to extract behavior from video
turing_patterns_bud_scars
The project investigates the effect of introducing a single hole on the unit sphere on the Turing patterns of the Schnakenberg model.
https://github.com/aksw/text2sparql-client
Command Line Client to retrieve SPARQL results from a TEXT2SPARQL conform endpoint.
bayesianml
This is a GitHub repository for our Bayeisan Machine Learning textbook, which includes the PDF for the book and accompanying Python notebooks.
gedidb
A toolbox for processing and providing Global Ecosystem Dynamics Investigation (GEDI) L2A-B and L4A-C data
https://github.com/dan-shields/rocketleagueirl
Rocket League comes to Real Life!
scoopika-core
The core of Scoopika, ecosystem for building controllable AI-powered applications
https://github.com/alicerunsonfedora/pale-shelter
A game for the Wowie! Jam about love.
https://github.com/alicerunsonfedora/lifelight
A game in Pygame about being a role model for others
ganx
The GitHub repository for the Python package ganX - generate artificially new XRF
https://github.com/anibulus/caesar_cipher
Program made in python 3.x that cipher the text that you introduce, and obviusly, unchipe also. The method that this program uses is 'Caesar Cipher'
https://github.com/anselmoo/mcp-server-analyzer
MCP server for Python code analysis with RUFF linting and VULTURE dead code detection
https://github.com/arnauqb/qsosed
Python module to compute the SED of an AGN following Kubota & Done (2018).
https://github.com/arturbomtempo-dev/process-automation
Project created to automate a company's processes and systems with Python.
https://github.com/astropenguin/pipenv-analysis-configs
:penguin: Create IPython, Jupyter, matplotlib custom configs in a Pipenv's environment
https://github.com/astropenguin/casa6-demo
:house: Demo Python environment for CASA 6 installation
https://github.com/astropenguin/astro-python-course
:rocket: Introductory course of Python and its libraries for data analysis in astronomy
https://github.com/astropenguin/pipenv-analysis-startup
:penguin: Example of IPython/Jupyter/matplotlib custom configs in a Pipenv's environment
https://github.com/atharvapathak/melanoma_detection_case_study
Creating a possible model to detect melanoma from the dataset accurately using CNN.
https://github.com/atom-sw/annotest
A tool to automatically generating bug-finding inputs for neural network program testing.
https://github.com/axect/quantumalgorithms
Implementations of Quantum Algorithms
https://github.com/axsk/augmented-jump-chain
Continuation of AJC work (2020-21) with trips to hitting time optimization, spa, sqra, isokann, committor neural network, sparse boxes, voronoi linear program, meta sgd, adaptive euler maruyama
https://github.com/basedosdados/pipelines
🔀 Orquestrador de fluxos de captura, ingestão e tratamento de dados da BD