stars-reproduce-hernandez-2015
Assessing the computational reproducibility of Hernandez et al. 2015 as part of STARS.
stars-reproduce-lim-2020
Assessing the computational reproducibility of Lim et al. 2020 as part of STARS.
pygrinder
PyGrinder: a Python toolkit for grinding data beans into the incomplete for real-world data simulation by introducing missing values with different missingness patterns, including MCAR (complete at random), MAR (at random), MNAR (not at random), sub sequence missing, and block missing
https://github.com/4ment/torchtree-plugin-template
A GitHub template for developing a torchtree plugin
convert-csv-schwab2pp
Converts a Charles Schwab transaction CSV file to a ready-to-import CSV file for Portfolio Performance.
https://github.com/edgesimpy/edgesimpy
Python-based modeling and simulation framework for Edge Computing resource management policies
https://github.com/fderuiter/imednet-python-sdk
A Unofficial Python SDK that makes it easy to work with the iMednet REST API from your code or the command line. Manage studies, subjects, records, and more with a "friendly" interface. No need to worry about the low-level details.
https://github.com/codingfisch/niftiview-app
Standalone app for viewing volumetric images 🧠 based on Python
developmentaldemo
Tutorial for developmental data with spectral parameterization.
ieeh-power-system-data-model
A hierarchical data model for the description of electrical power systems.
pyhistology
Python package that uses colorspace-based segmentation to analyze histopathology images.
gpr-uniandes
Humanitarian Demining Project by Universidad de los Andes, mainly supported by USAID.
https://github.com/abhishektiwari/flask-api-template-for-kubernetes
Cookiecutter Flask API template for Kubernetes (K8S)
pdll
Pairwise Difference Learning (PDL) is a meta-learning framework that leverages pairwise differences to transform multiclass problems into binary tasks. This repository includes the original PDL Classifier implementation, along with extended versions for regression and weighted learning scenarios.
https://github.com/acerbilab/pyibs
Inverse binomial sampling for efficient log-likelihood estimation of simulator models in Python
geospaitial-lab-aviary
Python Framework for tile-based processing of geospatial data
quantum-computing-qiskit-tool-wizard
The Quantum Computing Qiskit Tool Wizard software is purpose-built for Quantum Application Developers across industries who require a fast, reliable, and standardized way to set up their quantum development environments. The tool automates the creation of a Qiskit compliant virtual environment, tailored specifically for quantum application design.
amuse
Astrophysical Multipurpose Software Environment. This is the main repository for AMUSE
fhir-pyrate
FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured information as pandas DataFrames. It can also be used to filter resources using RegEx and SpaCy and download DICOM studies and series.
https://github.com/adamouization/code-in-place-2023
My slides and code solutions for the 2023 edition of the Stanford Code in Place online course.
rnaseq_pipeline
RNA-seq Data Processing, Quantification and Annotation Snakemake Workflow and MrBiomics Module.
cytologick
(WIP) PyTorch/TensorFlow powered semantic segmentation software for cytological slides
recirq
Python modules for quantum computing applications and experiments using Cirq. Research using Cirq!
dataverse-metadata-crawler
A Python CLI tool for bulk extracting and exporting metadata from Dataverse repositories' collections to JSON and CSV formats.
jupyterlabpymolpysnips
Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.
vuegen
VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications. Users simply provide a directory with output files and VueGen compiles them into a structured report.
https://github.com/ahmedshahriar/time-series-projects
Collection of my Time series Analysis Projects
graphics_project
Python Graphics Scene Render, using OpenGL as the primary rendering interface to create a vivid jungle scene. Includes polygon graphics, lighting, shadow mapping, shaders, meshes and skybox mapping.
https://github.com/agoose77/throttlestop
Simple tool to manage thermal behaviour on Linux
deeplearningcrashcourse
"Deep Learning Crash Course" is a comprehensive and up-to-date guide that takes you from simple neural networks all the way to cutting-edge deep learning architectures-no advanced math and programming required, just a basic knowledge of programming.
https://github.com/ahmedmoustafa/auc-dsci1412-fall2024
AUC Fundamentals of Data Science II Fall 2024
WindTurbineClassification
My master's dissertation on wind turbine fault prediction using machine learning
climatemind-backend
Your climate action is here 🌎 Our API is a source for learning how climate change personally affects you and the things you care about most. Additionally, it will teach a scientifically proven method for communicating to others that climate change is a personally relevant issue to inspire action.
https://github.com/ahmedshahriar/bd-ponno
Scrapy Mongodb Djongo integrated API that scrapes popular e-commerce sites (10+) from Bangladesh
https://github.com/trane-dev/trane
An open source python library for automated prediction engineering
https://github.com/ahmedshahriar/pulsepoint-data-analytics
EDA, data processing, cleaning and extensive geospatial analysis on a selenium based web scraped dataset
https://github.com/aidinhamedi/python-color-print-v2
A simple and user friendly way to print colored text to the console.
https://github.com/aidinhamedi/python-cli-toolkit
This Python CLI Toolkit is a powerful tool for creating command-line interfaces (CLI) with Python. It provides a framework for defining commands, handling user input, and managing modules.
https://github.com/alcrene/smttask
Maintain an electronic lab book for computational research
https://github.com/alfa-group/claw-sat
[SANER 2023] "CLAWSAT: Towards Both Robust and Accurate Code Models" by Jinghan Jia*, Shashank Srikant*, Tamara Mitrovska, Chuang Gan, Shiyu Chang, Sijia Liu, Una-May O'Reilly
url-shortner
URL Shortner is a simple yet powerful tool to generate short versions of urls to share them conveniently with others. It allows users to update the existing long urls without having to reshare a new short version of url with others. The application has been developed in Python & Angular.
electrum
Visualization platform for exploring MIDAS protein-small molecule interaction data
https://github.com/amanchokshi/non-normal
Generate non-normal distributions with given a mean, variance, skewness and kurtosis with python
applications-with-kivy-in-python
Repositório para o curso da framework kivy do python
gufo-liftbridge
Gufo Liftbridge is the Python asyncio Liftbridge client library.
sparklen
A statistical learning toolkit for high-dimensional Hawkes processes in Python
ipc-argentina
IPC-Argentina: Índice de Precios al Consumidor de Argentina. Serie de tiempo promedio de San Luis, Córdoba, CABA e INDEC. Actualizado diariamente. Análisis y visualización de la inflación mensual y cambio de precios en el último año.
https://github.com/amirzenoozi/image-color-analyzer
A Simple Color CLI Analyzer For Images
legalkit-pipeline
Publication pipeline for French legal codes on 🤗 Datasets from LegiFrance with concurrent upload and dynamic REAMDE.md.
cooper-optim
A general-purpose, deep learning-first library for constrained optimization in PyTorch
dei-blade-template
A project template to run experiments on the DEI's Blade cluster
bayesianml
This is a GitHub repository for our Bayeisan Machine Learning textbook, which includes the PDF for the book and accompanying Python notebooks.
gradient-decoding
Methods for decoding cortical gradients of functional connectivity
https://github.com/alexeyev/hse-spb-bigdata-python-fall2016
Материалы к курсу по программированию и инструментам анализа данных, прочитанному в петербургском филиале НИУ ВШЭ осенью 2016 года
https://github.com/alexisvassquez/ai_spotibot_player
AudioMIX is an open-source, AI-driven music production software designed to empower independent artists and DJs with mood-based audio analysis, LED integration, and creative autonomy. Spotibot was its original name.
https://github.com/alexpreynolds/kmer-boolean
Test if a kmer is or is not in a set of sequences
https://github.com/alfa-group/code-representations-ml-brain
[NeurIPS 2022] "Convergent Representations of Computer Programs in Human and Artificial Neural Networks" by Shashank Srikant*, Benjamin Lipkin*, Anna A. Ivanova, Evelina Fedorenko, Una-May O'Reilly.
https://github.com/amirzenoozi/openjourney-bot
I Developed a TelebramBot for OpenJourney which is OpenSource version of the MidJourney.