COHESIVM
COHESIVM: Combinatorial h+/e- Sample Investigation using Voltaic Measurements - Published in JOSS (2025)
autogpt
AutoGPT is the vision of accessible AI for everyone, to use and to build on. Our mission is to provide the tools, so that you can focus on what matters.
genome_tracks
A Snakemake workflow and MrBiomics module for easy visualization of genome browser tracks of aligned BAM files (e.g., RNA-seq, ATAC-seq, scRNA-seq, ...) powered by the wrapper gtracks for the package pyGenomeTracks, and IGV-reports.
https://github.com/actinia-org/actinia-statistic-plugin
This actinia plugin is designed for computing raster map and raster-time-series statistics for categorical and continuous data
https://github.com/acerbilab/pyibs
Inverse binomial sampling for efficient log-likelihood estimation of simulator models in Python
https://github.com/rio-labs/rio
WebApps in pure Python. No JavaScript, HTML and CSS needed
https://github.com/ArtLabss/open-data-anonymizer
Python Data Anonymization & Masking Library For Data Science Tasks
machine-learning-novice-sklearn
A Carpentry style lesson on machine learning with Python and scikit-learn.
https://github.com/acclab/dabest-python
Data Analysis with Bootstrapped ESTimation
https://github.com/astropenguin/jupyter-launcher
:rocket: Application for macOS to open *.ipynb in the Jupyter Notebook
https://github.com/access-nri/um-modify
um-modify is a standalone Python module to modify the data of a UM file
https://github.com/holgern/pyrdatasets
2293 datasets from various R packages packed as DataFrames through compressed pickle files
epds_ez
This project has been realized in the framework of the 90154 - Electronic Publishing and Digital Storytelling course taught by Prof. Marilena Daquino for the 2nd year DHDK Master Degree a.a. 2021-22. It visualizes some characteristics of the Partizione Antica of the Supino photographic Archival fund that has been analysed using both structured meta
stadyna
StaDynA: Addressing the Problem of Dynamic Code Updates in the Security Analysis of Android Applications
tcgui
A lightweight Python-based Web-GUI for Linux traffic control (tc) to set, view and delete traffic shaping rules.
easymcdm
Multiple-criteria decision-making (MCDM) with Electre, Promethee, Weighted Sum and Pareto
30daymapchallengeqgisperu
Mapatón orientada a compartir mapas temáticos diversos por cada día del mes, empleando software libre de código abierto.
https://github.com/austinjhunt/ibew-data-scraper
Automation of merged data collection and cleaning from ibew.org and unionfacts.com for an Upwork job.
python_template
A template repository for linting, testing, GUI building and dockerizing python scripts.
pytorch-project-template
A Simple Template For A PyTorch Classification Project 😄
ramanspy
RamanSPy: An open-source Python package for integrative Raman spectroscopy data analysis
https://github.com/abhishektiwari/flask-api-template-for-kubernetes
Cookiecutter Flask API template for Kubernetes (K8S)
movie-recommendation-chatbot
Movie Recommendation Chatbot provides information about a movie like plot, genre, revenue, budget, imdb rating, imdb links, etc. The model was trained with Kaggle’s movies metadata dataset. To give a recommendation of similar movies, Cosine Similarity and TFID vectorizer were used. Slack API was used to provide a Front End for the chatbot. IBM Watson was used to link the Python code for Natural Language Processing with the front end hosted on Slack API. Libraries like nltk, sklearn, pandas and nlp were used to perform Natural Language Processing and cater to user queries and responses.
https://github.com/awslabs/aurora-dsql-sqlalchemy
Aurora DSQL dialect for SQLAlchemy
repository-template
Applies best practices for OSS repositories for Gitlab and Github
precooltool
an online web application that enables you simulate solar pre-cooling for a range of exsiting buildings in Australian building stock.
https://github.com/awslabs/amazon-emr-vscode-toolkit
A VS Code Extension to make it easier to manage and develop Spark jobs on EMR
https://github.com/becksteinlab/hollow
Fork of Bosco Ho's and Franz Gruswitz's HOLLOW 1.1 (see http://hollow.sourceforge.net/).
https://github.com/artpelling/adaptive-era
Adaptive Randomized Eigensystem Realization Algorithm - Code for Numerical Experiments in "Adaptive Reduced Order Modelling of Discrete-Time Systems with Input-Output Dead Time"
chemfetchtool
ChemFetchTool is a web-based tool employing the PubChem PUG REST API endpoint for automated retrieval of molecular properties given only the compound name(s)
https://github.com/georgedouzas/imbalanced-learn-extra
Implementation of novel oversampling algorithms.
pycoupler
An LPJmL-Python interface for operating LPJmL in a Python environment and coupling it with Python models, programmes or simple programming scripts.
https://github.com/a-herzog/queuesim
QueueSim is a Python package for discrete event stochastic simulation of queueing networks. For Kendall models the performance indicators can also be computed using Erlang and Allen Cunneen approximation formulas.
https://github.com/chilipp/psyplot-ak-viewer-workshop-20210412
Presentation material for the psyplot demonstration at the Datahub AK Viewer workshop
genai-pod
GenAI is a command-line tool that streamlines image generation and webshop integration. By leveraging ChatGPT (via Selenium automation), it can programmatically create images, apply background removal, perform upscaling and finally publish these designs on popular print-on-demand platforms such as Spreadshirt and Redbubble.
https://github.com/datejada/intro-python-business-analytics
Notebooks for learning basic python concepts to apply in business analytics
k-space_wght_msk_for_mri_denoising
k-space weighting and masking for denoising of MRI image without blurring or losing contrast, as well as for brightening of the objects in the image with simultaneous noise reduction (on the example of Agilent FID data). (Python 3)
zarp-cli
A user-friendly command-line interface for the ZARP RNA-seq analysis workflow
https://github.com/grrvlr/tsmd
The TSMD project brings together Motif Discovery methods for Time Series, aiming to compare their performance through well-defined research questions and to simplify their practical use. It provides both guidelines for selecting the most suitable methods based on the data, and accessible implementations of the most relevant approaches.
https://github.com/bluebrain/data-validation-framework
Simple framework to create data validation workflows.
https://github.com/codingfisch/niftiview-app
Standalone app for viewing volumetric images 🧠 based on Python
https://github.com/robbisg/sekupy
Detergent for Multivariate Analysis Pipelines of Neuroimaging data in Python
https://github.com/wwu-mmll/deepbet
Fast brain extraction using neural networks
https://github.com/dbetchkal/public_dataglean_i
A Processing based tool to glean useful numeric results that are 'locked up' in a digital image
political-commercial-collection-archives
Project files, scripts, configurations, and workflow publications for the Julian P. Kanter Political Commercial Collection Project
mavros-px4-vehicle
A Python API developed to control a PX4-enabled drone with MAVROS commands.
https://github.com/cadop/humangenerator
A free and open source human generator integrated inside Nvidia Omniverse
https://github.com/cbg-ethz/scdna-pipe
Python data analysis pipeline for single cell copy number event history reconstruction
pose
A bare metal Python library for building and manipulating protein molecular structures
https://github.com/charlesneimog/py4pd-orchidea
It allows loading Orchidea samples using midi inputs.
https://github.com/charlesneimog/om-py
This repo aim to bring python to OM# enviroment!
https://github.com/cheind/monte-carlo-integration
Theory and implementation of Monte Carlo integration techniques
https://github.com/cicirello/pyaction
A Docker container with Python, git, and the Github CLI
https://github.com/code-archived/so-68554755
❓ Stack-Overflow Question Solution
https://github.com/code-ash-iit/tower_defense_ai
A fresh take on the classic tower defense game and AI to play it. Made in Python.
https://github.com/cptanalatriste/banana-hunter
A deep-reinforcement learning agent that loves bananas.
convert-csv-schwab2pp
Converts a Charles Schwab transaction CSV file to a ready-to-import CSV file for Portfolio Performance.
https://github.com/csbg/bioinformaticspracticals1
Student resources for UE Bioinformatische Übungen I
https://github.com/csinva/global-sports-analysis
Analyzing how different factors influence global sports rankings
tutorials
Jupyter Notebook tutorials using astronomical databases and virtual observatory tools
astroplasma
A Cloudy database with functions to quickly interpolate physical state of astrophysical plasma without detailed Plasma modelling
https://github.com/basedosdados/pipelines
🔀 Orquestrador de fluxos de captura, ingestão e tratamento de dados da BD
benchscofi
Package which contains implementations of published collaborative filtering-based algorithms for drug repurposing.
C4DYNAMICS: The Python framework for state-space modeling and algorithm development
C4DYNAMICS: The Python framework for state-space modeling and algorithm development - Published in JOSS (2025)
motila
Pipeline for analyzing microglial fine process motility from 4D/5D multi-photon imaging data
komanawa-basgra-nz-py
BASGRA or The BASic GRAssland model is a simple pasture growth model. This version, BASGRA_NZ has been specifically modified to model perennial ryegrass in New Zealand. This adaptation creates a python implementation.
remind-cancer
Bioinformatics pipeline to identify and prioritize activating Promoter SNVs (pSNVs) using genomic, transcriptomic and annotation data.