myokit
Source code, issues, and discussions for Myokit: A tool for cardiac electrophysiology modelling and simulation
pv_ice
An open-source tool to quantify Solar Photovoltaics (PV) Energy and Mass Flows in the Circular Economy, from a Reliability and Lifetime approach
pymeep
free finite-difference time-domain (FDTD) software for electromagnetic simulations
python-kraken-sdk
Command-line tool and SDK to access the Kraken Crypto Asset Exchange API (Spot & Futures, REST and Websocket API)
ustore
Multi-Modal Database replacing MongoDB, Neo4J, and Elastic with 1 faster ACID solution, with NetworkX and Pandas interfaces, and bindings for C 99, C++ 17, Python 3, Java, GoLang 🗄️
cellranger
Helper functions to work with spreadsheets and the "A1:D10" style of cell range specification
https://github.com/awslabs/amazon-ecr-credential-helper
Automatically gets credentials for Amazon ECR on docker push/docker pull
hn2016_falwa
Python library for computing Finite-Amplitude Local Wave Activity Diagnostics from climate data.
textgrid-tools
Command-line interface which provides methods to modify TextGrids (.TextGrid) and their corresponding audio files (.wav).
pypect2s
A GUI built to provide a contained base for the automation of the CT2S pipeline. With specific focus on paediatric applications. Utilising ANSYS and other FEM solver tools.
sslh
Deep Semi-Supervised Learning with Holistic methods for audio classification.
afxdp_perfeval
Performance Evaluation of AF_XDP Communication Patterns. Artifacts for "Are Kernel Drivers Ready For Accelerated Packet Processing Using AF_XDP?" paper published in IEEE NFV-SDN 2023
circulation.jl
Tools for computing velocity circulation statistics from periodic 3D Navier-Stokes and Gross-Pitaevskii fields
nback
This repository contains an n-back task for MATLAB using Psychtoolbox 3 (PTB-3).
fastapi-cli
Run and manage FastAPI apps from the command line with FastAPI CLI. 🚀
adl-benchmarks-index
A list of example analysis challenges and solved implementations of them in various languages
fer
Facial Expression Recognition with a deep neural network as a PyPI package
simplejson
simplejson is a simple, fast, extensible JSON encoder/decoder for Python
SpaceLiDAR
A Julia package for working with ICESat-2 & GEDI data as part of my PhD research
bmusegan
Code for “Convolutional Generative Adversarial Networks with Binary Neurons for Polyphonic Music Generation”
MuladdMacro
This package contains a macro for converting expressions to use muladd calls and fused-multiply-add (FMA) operations for high-performance in the SciML scientific machine learning ecosystem
ckanext-video
A CKAN extension for embedding Youtube or Vimeo videos as views.
semEff
Automatic Calculation of Effects for Piecewise Structural Equation Models
rdmo
A tool to support the planning, implementation, and organization of research data management.
parallel-hashmap
A family of header-only, very fast and memory-friendly hashmap and btree containers.
ball
Statistical Inference and Sure Independence Screening via Ball Statistics
jupyter4nfdi_survey_results
A Jupyter Notebook to showcase and explore the results of the Jupyter4NFDI user survey
nextits
A pipeline for metabarcoding fungi and other eukaryotes with full-length ITS sequenced with PacBio
multi-mode-cnn-pytorch
A PyTorch implementation of the Multi-Mode CNN to reconstruct Chlorophyll-a time series in the global ocean from oceanic and atmospheric physical drivers
cindy
CINDy: Conditional gradient-based Identification of Non-linear Dynamics – Noise-robust recovery
herbie-without-docs
A repository of Herbie without rendered documentation, just for demonstration purposes
@stdlib/blas-ext-base-gcusumkbn2
Calculate the cumulative sum of strided array elements using a second-order iterative Kahan–Babuška algorithm.
lls-core
Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.
pyfabm
The Framework for Aquatic Biogeochemical Models (FABM): a Fortran 2003 programming framework for biogeochemical models of marine and freshwater systems.
qecp
An educational tool to the introduction of Quantum Error Correction (QEC)
westpa
WESTPA: The Weighted Ensemble Simulation Toolkit with Parallelization and Analysis
zol
zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
tidysdm
R package to fit species distribution models (SDMs) using the 'tidymodels' framework
jupyterquiz
An interactive Quiz generator for Jupyter notebooks and Jupyter Book
triton
:whale: Scripps Whale Acoustics Lab :earth_americas: Scripps Acoustic Ecology Lab - Triton with remoras in development
torch-hd
Torchhd is a Python library for Hyperdimensional Computing and Vector Symbolic Architectures
httplib2
Small, fast HTTP client library for Python. Features persistent connections, cache, and Google App Engine support. Originally written by Joe Gregorio, now supported by community.
HOODESolver.jl
HOODESolver.jl: A Julia package for highly oscillatory problems - Published in JOSS (2021)
vpts-csv
Data exchange format for biological signals detected by weather radars
smart-agriculture-datasets
geo-trax
🚀 Geo-trax is a comprehensive pipeline for extracting and analyzing high-accuracy georeferenced vehicle trajectories from quasi-stationary, bird’s-eye view drone footage. Using advanced computer vision and deep learning, it enables detailed urban traffic analysis and supports scalable, precise studies of vehicle dynamics.
https://github.com/alan-turing-institute/paqarin
Python package for the generation and evaluation of synthetic time-series data.
darwincat
Shiny app visualizing the effects of carbonate stratigraphy on trait evolution
gis-python-power
Demonstration of the power of Python for GIS and Geosciences.
wgan-supported-augmentation
Morphological Classification of Radio Galaxies with wGAN-supported Augmentation
mrsoil
Package contains soil organic carbon cycling model based on IPCC Guidelines 2019 for data prepared in the madrat universe.
node-pathogens-portal
This toolbox contains minimal code for a Pathogens Portal Node (PPN). You can view a demo site at the URL below
udf-bioutils
Bioinformatics related user-defined functions for Cloudera Impala.
karyoploteR
karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
epiNEM
Epistatic Nested Effects Models - https://doi.org/10.1371/journal.pcbi.1005496 - https://bioconductor.org/packages/epiNEM/
cmip6-cookbook
Examples of analysis of Google Cloud CMIP6 data using Pangeo tools
sctransform
R package for modeling single cell UMI expression data using regularized negative binomial regression
https://github.com/azure/azure-sdk-for-js
This repository is for active development of the Azure SDK for JavaScript (NodeJS & Browser). For consumers of the SDK we recommend visiting our public developer docs at https://docs.microsoft.com/javascript/azure/ or our versioned developer docs at https://azure.github.io/azure-sdk-for-js.
eprints2bags
Download records and documents from an EPrints server and put them in BagIt format.
