neuprint-python • Rank 13.4 • Science 44%

Python client utilties for interacting with the neuPrint connectome analysis service

https://github.com/bbfrederick/picachooser • Rank 8.4 • Science 49%

A fast lightweight gui tool for sorting components from a MELODIC probabilistic ICA analysis

marameters • Rank 13.4 • Science 44%

A dynamic method parameter inspector.

kerchunk • Rank 21.4 • Science 36%

Cloud-friendly access to archival data

dl1-data-handler • Rank 11.4 • Science 46%

DL1 HDF5 format IACT data writer + reader + processor

sublime_text_kit • Rank 13.3 • Science 44%

A command line interface for managing Sublime Text metadata.

arco-era5 • Rank 8.3 • Science 49%

Recipes for reproducing Analysis-Ready & Cloud Optimized (ARCO) ERA5 datasets.

https://github.com/amypad/miutil • Rank 11.3 • Science 46%

Basic functionality needed for AMYPAD

caerus • Rank 13.3 • Science 44%

Detection of favorable moments in time series data

icechunk • Rank 21.3 • Science 36%

Open-source, cloud-native transactional tensor storage engine

geojson • Rank 31.3 • Science 26%

Python bindings and utilities for GeoJSON

stlc_debruijn • Rank 3.3 • Science 54%

Simply Typed Lambda Calculus with de Bruijn indices

ecfo • Rank 3.3 • Science 54%

The Emission Conversion Factor Ontology

fortran-submodule • Rank 3.3 • Science 54%

Examples of modern Fortran 2008 submodule

reproducible-ml-workflows • Rank 3.3 • Science 54%

Reproducible Machine Learning Workflows for Scientists

bluesky • Rank 21.3 • Science 36%

experiment orchestration and data acquisition

dacy • Rank 13.3 • Science 44%

DaCy: The State of the Art Danish NLP pipeline using SpaCy

oceansdb • Rank 11.3 • Science 46%

A database of marine reference data like climatologies and bathymetry

ats • Rank 8.3 • Science 49%

Advanced Terrestrial Simulator (ATS) development

ggbio • Rank 21.3 • Science 36%

Grid and ggplot2 based visualization for biological data

pyrandtoys • Rank 3.3 • Science 54%

A python module for generating the result of probability-based toys. Installable on any system with pip command.

aptv2 • Rank 3.3 • Science 54%

The official repo for the extension of [NeurIPS'22] "APT-36K: A Large-scale Benchmark for Animal Pose Estimation and Tracking": https://github.com/pandorgan/APT-36K

https://github.com/alleninstitute/tasic2016data • Rank 3.3 • Science 54%

Single cell transcriptomic data from Tasic, et al. (2016)

organic-fertilizers-detection • Rank 3.3 • Science 54%

Detection of organic fertilizers (manure) application on crop fields leveraging satellite data and Machine Learning.

canada-labour-research-assistant • Rank 3.3 • Science 54%

The Canada Labour Research Assistant (CLaRA) is a privacy-first LLM-powered RAG AI assistant proposing Easily Verifiable Direct Quotations (EVDQ) to mitigate hallucinations in answering questions about Canadian labour laws, standards, and regulations. It works entirely offline and locally, guaranteeing the confidentiality of your conversations.

mc-crawler • Rank 3.3 • Science 54%

A MobileCoin network crawler. Corresponding preprint available on arXiv (https://arxiv.org/pdf/2111.12364.pdf).

graphscope • Rank 21.3 • Science 36%

🔨 🍇 💻 🚀 GraphScope: A One-Stop Large-Scale Graph Computing System from Alibaba | 一站式图计算系统

https://github.com/cheminfo/convert-to-jcamp • Rank 11.3 • Science 46%

Convert strings into JCAMP

huggingsound • Rank 13.3 • Science 44%

HuggingSound: A toolkit for speech-related tasks based on Hugging Face's tools

omero-py • Rank 21.3 • Science 36%

Python project containing Ice remoting code for OMERO

pcsstools • Rank 8.3 • Science 49%

Tools for regression using pre-computed summary statistics

@stdlib/object-ctor • Rank 13.3 • Science 44%

Object constructor.

clustermole • Rank 13.3 • Science 44%

Unbiased single-cell transcriptomic data cell type identification

pick • Rank 21.3 • Science 36%

create curses based interactive selection list in the terminal

drone-data-in-agricultural-research • Rank 3.3 • Science 54%

Lessons on working with multispectral drone based data in agricultural research settings

platon • Rank 11.2 • Science 46%

Fast exoplanet transmission spectrum calculator

nglview-js-widgets • Rank 21.2 • Science 36%

Jupyter widget to interactively view molecular structures and trajectories

cubar • Rank 8.2 • Science 49%

R Package for Codon Usage Bias Analysis. Comprehensive documentation and tutorials are available at:

fido • Rank 11.2 • Science 46%

Multinomial Logistic-Normal Models (really fast)

baler-compressor • Rank 11.2 • Science 46%

Repository of Baler, a machine learning based data compression tool

dcache • Rank 11.2 • Science 46%

dCache - a system for storing and retrieving huge amounts of data, distributed among a large number of heterogenous server nodes, under a single virtual filesystem tree with a variety of standard access methods

pyPLNmodels — Peer-reviewed • Rank 8.2 • Science 49%

pyPLNmodels: A Python package to analyze multivariate high-dimensional count data - Published in JOSS (2024)

grpSLOPE • Rank 8.2 • Science 49%

Group SLOPE (Group Sorted L1 Penalized Estimation)

micompr • Rank 8.2 • Science 49%

Multivariate independent comparison of observations.

id • Rank 21.2 • Science 36%

A tool for generating OIDC identities

tf2deepfloorplan • Rank 6.2 • Science 51%

TF2 Deep FloorPlan Recognition using a Multi-task Network with Room-boundary-Guided Attention. Enable tensorboard, quantization, flask, tflite, docker, github actions and google colab.

pysodmetrics • Rank 13.2 • Science 44%

PySODMetrics: A Simple and Efficient Implementation of Grayscale/Binary Segmentation Metrcis

infusible • Rank 13.2 • Science 44%

An automatic dependency injector.

https://github.com/girder/girder • Rank 21.2 • Science 36%

A data management platform for the web, developed by Kitware

tei-xml • Rank 3.2 • Science 54%

Lesson: Introduction to TEI (under development)

ec-finder • Rank 3.2 • Science 54%

EcFinder: Python library and script to fuzzy search an enzyme EC number from an enzyme name

cbdc-offline-sim • Rank 3.2 • Science 54%

A CBDC simulation framework, designed to simulate an offline implementation with a barabasi albert graph and fradulent nodes. Markov processes are used for up and down states as well as transaction frequency.

h5fortran-mpi • Rank 3.2 • Science 54%

HDF5-MPI parallel Fortran object-oriented interface

spynnakervisualisers • Rank 3.2 • Science 54%

Visualisation clients for special sPyNNaker networks.

multiagenttrajectoryplanning • Rank 3.2 • Science 54%

Experiments of the "Multi-Agent Trajectory Planning with NUV Priors" paper

jreferral • Rank 3.2 • Science 54%

An open-source tool that recommends the most energy efficient JVM configuration for java software

nerf-us • Rank 3.2 • Science 54%

Official code for NeRF-US: Removing Ultrasound Imaging Artifacts from Neural Radiance Fields in the Wild

springwebsite • Rank 3.2 • Science 54%

Website code of Spring benchmark

piptools-sync • Rank 3.2 • Science 54%

A pre-commit plugin that syncs the pre-commit package versions with the versions generated by pip-tools

dynaface • Rank 3.2 • Science 54%

Dynaface is both a computer application and Python library to measure facial symmetry utilizing advanced AI for both symmetric and asymmetric faces.

docling4j • Rank 3.2 • Science 54%

Docling4j brings the functionalities of Docling in document understanding to Java® projects

micrometaexplorer • Rank 3.2 • Science 54%

Micro-Meta Explorer is used to compare and explore different Micro-Meta App generated microscope hardware JSON files

textx • Rank 21.2 • Science 36%

Domain-Specific Languages and parsers in Python made easy http://textx.github.io/textX/

forte • Rank 16.2 • Science 41%

Forte is a flexible and powerful ML workflow builder. This is part of the CASL project: http://casl-project.ai/

emmeans • Rank 21.1 • Science 36%

Estimated marginal means

celer-gnark • Rank 3.1 • Science 54%

A copy of celer-gnark for icicle integration

prediction-of-pcos-using-optimized-ml-classifiers • Rank 3.1 • Science 54%

Official Code Files For My Research Paper Presented at 3rd International Conference on Artificial Intelligence: Advances and Applications (ICAIAA 2022). Paper Published in Springer Book Series, "Algorithms for Intelligent Systems (AIS)".

xarray-spatial • Rank 21.1 • Science 36%

Raster-based Spatial Analytics for Python

https://github.com/althonos/pubchem.rs • Rank 11.1 • Science 46%

Rust data structures and client for the PubChem REST API

specutils • Rank 21.1 • Science 36%

An Astropy coordinated package for astronomical spectroscopy. Maintainers: @rosteen @keflavich @eteq

toil • Rank 21.1 • Science 36%

A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

@stdlib/math-base-special-pow • Rank 13.1 • Science 44%

Exponential function.

piq • Rank 21.1 • Science 36%

Measures and metrics for image2image tasks. PyTorch.

lwgeom • Rank 21.1 • Science 36%

bindings to the liblwgeom library

markdown-include-variants • Rank 13.1 • Science 44%

Markdown extension to expand directives to include source example files to also include their variants. Only useful to tiangolo's projets. Don't use it. 😅

neutcurve • Rank 8.1 • Science 49%

Fit and plot neutralization curves

siphon • Rank 21.1 • Science 36%

Siphon - A collection of Python utilities for retrieving atmospheric and oceanic data from remote sources, focusing on being able to retrieve data from Unidata data technologies, such as the THREDDS data server.

m2g • Rank 11.1 • Science 46%

NeuroData's MRI to Graphs (m2g) - connectome estimation package and pipeline

funrar • Rank 11.1 • Science 46%

:package: R package to compute functional rarity indices (functional distinctiveness, uniqueness, restrictedness, scarcity)

pedsuite • Rank 8.1 • Science 49%

R packages for pedigree analysis

hbamr • Rank 8.1 • Science 49%

Hierarchical Bayesian Aldrich-McKelvey Scaling in R via Stan

https://github.com/compvis/latent-diffusion • Rank 11.1 • Science 46%

High-Resolution Image Synthesis with Latent Diffusion Models

cbgp-lite • Rank 3.1 • Science 54%

Code Building Genetic Programming for a narrow subset of the Clojure language.

papers • Rank 3.1 • Science 54%

Contains the code for the paper "Multi-Horizon Short-Term Load Forecasting Using Hybrid of LSTM and Modified Split Convolution"

ganscapegenerator • Rank 3.1 • Science 54%

Generating Landscapes Using DCGAN and StyleGAN3 🏞️

clear.cmd • Rank 3.1 • Science 54%

Clear screen like Unix in Windows Command prompt.

Business-ISSN • Rank 3.1 • Science 54%

gfort2py • Rank 11.1 • Science 46%

Library to allow calling fortran code from python

eurocropsml • Rank 8.1 • Science 49%

EuroCropsML is a ready-to-use benchmark dataset for few-shot crop type classification using Sentinel-2 imagery.

ixpeobssim • Rank 11.1 • Science 46%

Simulation and analysis framework for the Imaging X-ray Polarimetry Explorer

crypto2 • Rank 13.1 • Science 44%

Cryptocurrency Market Data

https://github.com/biojulia/xam.jl • Rank 11.1 • Science 46%

Parse and process SAM and BAM formatted files

py-torchmeta • Rank 19.1 • Science 38%

A collection of extensions and data-loaders for few-shot learning & meta-learning in PyTorch

sparrpowR • Rank 8.0 • Science 49%

Power Analysis to Detect Spatial Relative Clusters in R

mifa • Rank 8.0 • Science 49%

An R package providing multiple Imputation of covariance matrices in order to perform factor analysis.

architecture-decision-record • Rank 13.0 • Science 44%

Architecture decision record (ADR) examples for software planning, IT leadership, and template documentation

HePPCAT • Rank 6.0 • Science 51%

Probabilistic PCA for samples with heterogeneous quality

voluModel • Rank 8.0 • Science 49%

R package for distributional modeling in 3 dimensions

neatStats • Rank 8.0 • Science 49%

neatStats: An R package for neat and painless statistical reporting.

idconverter • Rank 8.0 • Science 49%

Convert Identifiers in Biological Databases