SugarKelp
Model of Saccharina latissima (sugar kelp) based on Broch and Slagstad, 2012
edfi
:earth_asia: EDFI is an open-source script to extract data from a 2D or 3D image.
louvain-communities-openmp-dynamic
Design of OpenMP-based Parallel Dynamic Louvain algorithm for community detection.
snhic
Snakemake pipeline for analysis and normalization of Hi-C data starting from fastq.gz files. It includes the possibility to perform grouped analyses, TAD, loops and stripes detections, as well as differential compartment and chromatin interaction analyses.
actualizer
[MIRROR] A Simple, Single Shell Script Solution to Create Lean, Secure, Upstream Compliant, and Customizable Debian from the ground up.
kipper
The Kipper programming language for comprehensive and all-round type safety on the web 🦊✨ Made at HTL Leonding & JKU Linz
https://github.com/clima/cloudmicrophysics.jl
A library of cloud microphysics parameterizations
dmipy
The open source toolbox for reproducible diffusion MRI-based microstructure estimation
somoclu
Massively parallel self-organizing maps: accelerate training on multicore CPUs, GPUs, and clusters
https://github.com/chaoss/grimoirelab
GrimoireLab: platform for software development analytics and insights
sw4
SW4 (Seismic Waves, 4th order) implements substantial capabilities for 3-D seismic modeling, with a free surface condition on the top boundary, absorbing super-grid conditions on the far-field boundaries, and an arbitrary number of point force and/or point moment tensor source terms.
https://github.com/cloudslab/cloudsim
CloudSim: A Framework For Modeling And Simulation Of Cloud Computing Infrastructures And Services
polylabel
A fast algorithm for finding the pole of inaccessibility of a polygon (in JavaScript and C++)
cbsodata
Unofficial Statistics Netherlands (CBS) open data API client for Python
duello
Osmotic second virial coefficient (𝐵₂) and dissociation constant (𝐾𝑑) for two rigid macromolecules
StaticArrayInterface
Interface designs for enforcing static computations in array functions with Julia
blobctrl
[Arxiv'25] BlobCtrl: A Unified and Flexible Framework for Element-level Image Generation and Editing
leaflet-geoserver-request
This is the leaflet plugin for GeoServer. Using this plugin user can have access to wms and wfs request easily.
DIscBIO
A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics
pymialsrtk
The Medical Image Analysis Laboratory Super-Resolution ToolKit (MIALSRTK) consists of a set of C++ and Python processing and workflow tools necessary to perform motion-robust super-resolution fetal MRI reconstruction in the BIDS Apps framework.
montecarlomeasurements.jl
Propagation of distributions by Monte-Carlo sampling: Real number types with uncertainty represented by samples.
scattertext
Beautiful visualizations of how language differs among document types.
secsse
Several Examined and Concealed States-dependent Speciation and Extinction
mbari-pbp
Process ocean audio data archives to daily analysis products of hybrid millidecade spectra using PyPAM.
eprints2archives
Send records from an EPrints server to the Internet Archive and other web archives
g-tomo-3d
G-Tomo (Galactic Tomography) app for exploitation of 3d dust extinction in the local galaxy. 3d visualiser (slice & annotate)
glenoidplanefitting
A tool kit for performing Glenoid version measurement for shoulder reconstruction surgery
wifi-based-landmark-estimation
Research project files concerning non-stationary landmark localization
socrates
Code and supplementary material for "SOCRATES: Introducing Depth in Visual Wildlife Monitoring using Stereo Vision" (WIP)
keepthebeesalive
Keep the bees alive by building a shelter for their hive in this physics-based balancing game. Stack construction elements carefully to protect the bees from the rain. Inspired by the iconic Bee Gees hit *Staying Alive*, this game blends strategic thinking with a groovy soundtrack. Can you keep the hive safe and buzzing?
prisma-flow-diagram
This package provides an abstraction for creating PRISMA 2009 flow diagrams in LaTeX.
voc4fun-server
A mobile application featuring a flashcard learning system with a self-regulating learning mechanism. It dynamically adjusts daily goals based on the learner's progress.
https://github.com/cbg-ethz/ctc-scite
Computational method and analyses to study the clonality of circulating tumor cell clusters
stars-reproduce-allen-2020
Test-run of our reproducibility protocol on Allen et al. 2020: "A simulation modelling toolkit for organising outpatient dialysis services during the COVID-19 pandemic"
agents
Reproducible results for the various types of reinforcement algorithms I have implemented
visualroberta
The first public Vietnamese visual linguistic foundation model(s)
hochfrequente_mental_health_surveillance
Im Rahmen der Mental Health Surveillance (MHS) am Robert Koch-Institut (RKI) werden für eine Auswahl an Indikatoren der psychischen Gesundheit von Erwachsenen basierend auf Surveydaten Zeitreihen bestehend aus gleitenden Drei-Monats-Schätzern und Glättungskurven berechnet. Dadurch sollen Entwicklungen in der psychischen Gesundheit der erwachsene...
coordinate-regression
Coordinate regression with biologically realistic neural networks
dsd-vocabulary
The Data Source Description Vocabulary (DSD) allows the representation of data sources and their internal structure independently of their type.
predictive-maintenance-on-cable-joints
A project for predictive maintenance of cable joints within Alliander's electricity grid. This project is executed by Sioux Technologies with supervision from Wageningen University for Alliander.
biodt-fair
Documentation, resources, and other materials related to FAIR and open science from the BioDT project.
proteinfertorch
Unofficial PyTorch version of ProteInfer, originally implemented in TensorFlow 1.X and converted for PyTorch compatibility.
myriam
MYRIAM is an open-access, computationally-inexpensive, user-friendly software that allow users to compute the torque variations required to produce given changes in plate motions.
WorldOceanAtlasTools
Tools do download and interpolate data from the World Ocean Atlas
mjoindices
This repository provides a Python implementation of the calculation algorithm for the OLR-based MJO index (OMI).
xcfun
XCFun: A library of exchange-correlation functionals with arbitrary-order derivatives
synopticpy
Retrieve mesonet weather data as Polars DataFrames from Synoptic's Weather API.
howfairis
Command line tool to analyze a GitHub or GitLab repository's compliance with the fair-software.eu recommendations
hfradarpy
Toolbox to read in High Frequency Radar (HFR) files written in the Codar Tabular Format (CTF). Easily read CODAR Ocean Sensors SeaSonde and HELZEL Messtechnik GmbH WERA radial files.
@stdlib/random-base-minstd
A linear congruential pseudorandom number generator (LCG) based on Park and Miller.