graphqler • Rank 6.4 • Science 64%

🔍A cutting edge context aware GraphQL API fuzzing tool!

adcc • Rank 11.4 • Science 59%

adcc: Seamlessly connect your program to ADC

Dagger • Rank 16.4 • Science 54%

A framework for out-of-core and parallel execution

d3graph • Rank 16.4 • Science 54%

Creation of interactive networks using d3 Javascript

signalgp-lite • Rank 3.4 • Science 67%

kirsche • Rank 3.4 • Science 67%

:cherries: Kirsche, connecting your references.

tappy • Rank 3.4 • Science 67%

Command line script and Python package for tidal analysis - Tidal Analysis Program in PYthon

cromp • Rank 3.4 • Science 67%

The official implementation of CROMP (Constrained Regression with Ordered and Margin-sensitive Parameters) along with experimental test pipeline

trained_yolo • Rank 6.4 • Science 64%

mrfeed • Rank 3.4 • Science 67%

prompt-engineering-guide • Rank 16.4 • Science 54%

🐙 Guides, papers, lecture, notebooks and resources for prompt engineering

ioos_code_lab • Rank 6.4 • Science 64%

Notebook demonstrations and examples

hmmtmb • Rank 11.3 • Science 59%

Fit hidden Markov models using Template Model Builder (TMB): flexible state-dependent distributions, transition probability structures, random effects, and smoothing splines.

openpathsampling • Rank 16.3 • Science 54%

An open source Python framework for transition interface and path sampling calculations.

pyafq • Rank 8.3 • Science 62%

Please visit our new location: https://github.com/tractometry/pyAFQ

aspect • Rank 11.3 • Science 59%

A parallel, extensible finite element code to simulate convection in both 2D and 3D models.

dxtbx • Rank 13.3 • Science 57%

Diffraction Experiment Toolbox

tumoroscope-pymc • Rank 3.3 • Science 67%

Python package of the 'Tumoroscope' model implemented in PyMC.

retorch • Rank 3.3 • Science 67%

RETORCH: Resource-aware End-to-End Test Orchestration

pdesy • Rank 3.3 • Science 67%

Python package of Discrete Time-Event Simulator (DES) for engineering project. It aims to be the fundamental high-level building block for doing practical, real world engineering project management by DES and project modeling.

cavaanalytics • Rank 3.3 • Science 67%

CAVAanalytics is a comprehensive framework for climate data analysis, offering streamlined access to data, advanced processing and visualization capabilities. It is designed to support a wide range of climate research and user needs

sensorium • Rank 3.3 • Science 67%

NeurIPS | 1st place solution for Sensorium 2023 Competition

pygrin • Rank 6.3 • Science 64%

A python module to ray trace through gradient index (GRIN) lenses.

https://github.com/sparks-baird/self-driving-lab-demo • Rank 11.3 • Science 59%

Software and instructions for setting up and running a self-driving lab (autonomous experimentation) demo using dimmable RGB LEDs, an 8-channel spectrophotometer, a microcontroller, and an adaptive design algorithm, as well as extensions to liquid- and solid-based color matching demos.

h5py • Rank 34.3 • Science 36%

HDF5 for Python -- The h5py package is a Pythonic interface to the HDF5 binary data format.

https://github.com/cvxgrp/diffcp • Rank 16.3 • Science 54%

Differentiation through cone programs

pymech • Rank 6.3 • Science 64%

A Python software suite for Nek5000 and SIMSON

PySPOD — Peer-reviewed • Rank 11.3 • Science 59%

PySPOD: A Python package for Spectral Proper Orthogonal Decomposition (SPOD) - Published in JOSS (2021)

https://github.com/react-navigation/react-navigation • Rank 34.3 • Science 36%

Routing and navigation for React Native and Web apps

numerical_methods_introduction • Rank 3.3 • Science 67%

A set of Jupyter Notebooks demonstrating various numerical methods in Python.

leaflet-providersesp • Rank 3.3 • Science 67%

An extension to Leaflet that contains configurations for various free WMS (Web Map Service) and WMTS (Web Map Tile Service) providers of Spain (IDErioja, PNOA, IGN base, Catastro, etc), from Spanish mapping agencies.

metagenomics-workshop • Rank 6.3 • Science 64%

Metagenomics Workshop Overview

imitation • Rank 19.3 • Science 51%

Clean PyTorch implementations of imitation and reward learning algorithms

pydarnio • Rank 11.3 • Science 59%

Python Library for read in SuperDARN data

liburing • Rank 16.3 • Science 54%

Library providing helpers for the Linux kernel io_uring support

ucall • Rank 16.3 • Science 54%

Web Serving and Remote Procedure Calls at 50x lower latency and 70x higher bandwidth than FastAPI, implementing JSON-RPC & REST over io_uring ☎️

ace • Rank 11.3 • Science 59%

Ai2 Climate Emulator

scFeatures • Rank 13.3 • Science 57%

multiscale_spatial_image • Rank 16.3 • Science 54%

Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.

scatterd • Rank 16.3 • Science 54%

Scatterd is a Python package for easy and fast creation of beautiful scatter plots.

shockhash • Rank 3.3 • Science 67%

Towards Optimal-Space Minimal Perfect Hashing Beyond Brute-Force

myfempy • Rank 3.3 • Science 67%

Myfempy is a python package based on finite element method to multiphysics analysis.

compoda • Rank 3.3 • Science 67%

Simplex space operations for compositional data implemented in Python.

teeplot • Rank 3.3 • Science 67%

organize data visualization output, automatically picking meaningful names based on semantic plotting variables

structuralcoexistence • Rank 3.3 • Science 67%

Shiny app to explore structural approach to species coexistence

@stdlib/math-base-special-cinv • Rank 3.3 • Science 67%

Compute the inverse of a complex number.

quantumaudio • Rank 3.3 • Science 67%

Tools, circuits, examples & applications of Quantum Representations of Audio in qubit systems

DiffEqNoiseProcess • Rank 16.3 • Science 54%

A library of noise processes for stochastic systems like stochastic differential equations (SDEs) and other systems that are present in scientific machine learning (SciML)

climaland.jl • Rank 13.2 • Science 57%

Clima's Land Model

BesselK • Rank 6.2 • Science 64%

An AD-compatible modified second-kind Bessel function.

https://github.com/arklumpus/treenode • Rank 11.2 • Science 59%

Read, write and manipulate phylogenetic trees

cdr-database • Rank 6.2 • Science 64%

reports on carbon removal projects and technologies

psyke • Rank 13.2 • Science 57%

PSyKE: a (Python) platform for symbolic knowledge extraction

dea_seurat • Rank 3.2 • Science 67%

A Snakemake workflow and MrBiomics module for performing differential expression analyses (DEA) on (multimodal) sc/snRNA-seq data powered by the R package Seurat.

alz-predict-roivsnonroi • Rank 3.2 • Science 67%

Deep learning pipeline for efficiently predict Alzheimer's Disease from ADNI & OASIS

fair-dash • Rank 3.2 • Science 67%

A simple static site generator for getting repo statistics.

humolire • Rank 3.2 • Science 67%

HuMoLiRe is a Pedestrian Dead-Reckoning Particle Filter Map-aided system that leverages human motion likelihood in indoor spaces to estimate their position. This repository is the dataset and software published with its paper.

hail • Rank 24.2 • Science 46%

Cloud-native genomic dataframes and batch computing

monet • Rank 8.2 • Science 62%

The Model and ObservatioN Evaluation Toolkit (MONET)

pysyft • Rank 24.2 • Science 46%

Perform data science on data that remains in someone else's server

Convex • Rank 16.2 • Science 54%

A Julia package for disciplined convex programming

pmdarima • Rank 26.2 • Science 44%

A statistical library designed to fill the void in Python's time series analysis capabilities, including the equivalent of R's auto.arima function.

rainette • Rank 11.2 • Science 59%

R implementation of the Reinert text clustering method

tox • Rank 34.2 • Science 36%

Command line driven CI frontend and development task automation tool.

https://github.com/kevinshen56714/emc-pypi • Rank 11.2 • Science 59%

Python interface for Enhanced Monte Carlo (EMC)

https://github.com/cda-tum/mnt-bench • Rank 3.2 • Science 67%

MNT Bench - An MNT tool for Benchmarking FCN circuits

Emporium • Rank 3.2 • Science 67%

This package provides a selection of useful "scripts" for the project maintainer. Useful for automated changes to large collections of packages.

ceresfit • Rank 3.2 • Science 67%

Linear Regression for data set with correlated or uncorrelated uncertainties in both axes.

g-tomo • Rank 3.2 • Science 67%

G-Tomo (Galactic Tomography) app for exploitation of 3d dust extinction in the local galaxy. Extraction of 1d profiles and 2d maps (slices)

nextjstemplate • Rank 3.2 • Science 67%

Biodesign Digital Health NextJS Template

bikenwgaps • Rank 3.2 • Science 67%

Automated detection of gaps in bicycle networks: source code for IPDC procedure

enhancing_reaxff • Rank 3.2 • Science 67%

Jupyter notebooks used for retraining the ReaxFF force field for the inorganic compound LiF.

https://github.com/biocore/qurro • Rank 11.2 • Science 59%

Visualize differentially ranked features (taxa, metabolites, ...) and their log-ratios across samples

brotli • Rank 34.2 • Science 36%

Brotli compression format

nexmon • Rank 11.2 • Science 59%

The C-based Firmware Patching Framework for Broadcom/Cypress WiFi Chips that enables Monitor Mode, Frame Injection and much more

nmma • Rank 11.2 • Science 59%

A pythonic library for probing nuclear physics and cosmology with multimessenger analysis

nab • Rank 11.2 • Science 59%

The Numenta Anomaly Benchmark

sigfig • Rank 16.1 • Science 54%

This is the sigfig Python package used for rounding numbers (with expected results)

openstef • Rank 16.1 • Science 54%

Automated Machine Learning pipelines. Builds the Open Short Term Energy Forecasting package.

ExaAdmm • Rank 6.1 • Science 64%

Julia implementation of ADMM solver on multiple GPUs

soniscope-jupyter • Rank 5.1 • Science 65%

jupyter notebook widget with a scatter plot and an interactive lens to enable interactive sonification

python-twitter • Rank 34.1 • Science 36%

A Python wrapper around the Twitter API.

rogue • Rank 11.1 • Science 59%

Identify rogue taxa in phylogenetic trees within R

mapSpain • Rank 13.1 • Science 57%

R package with the administrative boundaries of Spain, including CCAA, provinces and municipalities

alpaka • Rank 11.1 • Science 59%

Abstraction Library for Parallel Kernel Acceleration :llama:

geos-chem • Rank 11.1 • Science 59%

GEOS-Chem "Science Codebase" repository. Contains GEOS-Chem science routines, run directory generation scripts, and interface code. This repository is used as a submodule within the GCClassic and GCHP wrappers, as well as in other modeling contexts (external ESMs).

stplanr • Rank 21.1 • Science 49%

Sustainable transport planning with R

impact • Rank 3.1 • Science 67%

IMPaCT: Interval MDP Parallel Construction for Controller Synthesis of Large-Scale Stochastic Systems. IMPaCT is an open-source software tool for the parallelized verification and controller synthesis of large-scale stochastic systems using interval Markov chains (IMCs) and interval Markov decision processes (IMDPs).

https://github.com/SciML/Optimization.jl • Rank 11.1 • Science 59%

Mathematical Optimization in Julia. Local, global, gradient-based and derivative-free. Linear, Quadratic, Convex, Mixed-Integer, and Nonlinear Optimization in one simple, fast, and differentiable interface.

mmhuman3d • Rank 16.1 • Science 54%

OpenMMLab 3D Human Parametric Model Toolbox and Benchmark

future • Rank 34.1 • Science 36%

Easy, clean, reliable Python 2/3 compatibility

netplotbrain • Rank 11.1 • Science 59%

A package to create simple 3D network visualizations on a brain.

ckanext-statistics • Rank 8.1 • Science 62%

A CKAN extension for accessing download statistics

ckanext-list • Rank 8.1 • Science 62%

A CKAN extension that adds a list view for resources.

pytest-cov • Rank 34.0 • Science 36%

Coverage plugin for pytest.

qualle • Rank 3.0 • Science 67%

Implementation of Qualle Framework as proposed in the paper "Content-Based Quality Estimation for Automatic Subject Indexing of Short Texts under Precision and Recall Constraints" and accompanying source code by Martin Toepfer and Christin Seifert.

distance-estimation • Rank 3.0 • Science 67%

Distance Estimation for Estimating Animal Abundance

sygma • Rank 3.0 • Science 67%

A python library for prediction of drug metabolites

com.github.spinalhdl:spinalhdl-all_2.11 • Rank 16.0 • Science 54%

Scala based HDL

NN-SVG — Peer-reviewed • Rank 11.0 • Science 59%

NN-SVG: Publication-Ready Neural Network Architecture Schematics - Published in JOSS (2019)