pyprobables
Probabilistic data structures in python http://pyprobables.readthedocs.io/en/latest/index.html
netascore
NetAScore - Network Assessment Score Toolbox for Sustainable Mobility
datasketch
MinHash, LSH, LSH Forest, Weighted MinHash, HyperLogLog, HyperLogLog++, LSH Ensemble and HNSW
https://github.com/unit8co/darts
A python library for user-friendly forecasting and anomaly detection on time series.
https://github.com/alan-turing-institute/distinctipy
A lightweight package for generating visually distinct colours.
topostats
An AFM image analysis program to batch process data and obtain statistics from images
https://github.com/quakemigrate/quakemigrate
A Python package for automatic earthquake detection and location using waveform migration and stacking.
optical-beams-meep
Simulation of reflection and refraction of polarized opticial beams at plane and curved dielectric interfaces.
https://github.com/bokeh/bokeh
Interactive Data Visualization in the browser, from Python
https://github.com/glue-viz/glue
Linked Data Visualizations Across Multiple Files
PyProximal - scalable convex optimization in Python
PyProximal - scalable convex optimization in Python - Published in JOSS (2024)
napari-time-series-plotter
A napari Plugin for visualisaton of pixel values over time (t+ nD) as graphs.
scapy
Scapy: the Python-based interactive packet manipulation program & library.
https://github.com/choderalab/openmmtools
A batteries-included toolkit for the GPU-accelerated OpenMM molecular simulation engine.
deterministicparticleflowcontrol
Repository for Deterministic Particle Flow Control framework
lfpykernels
Forward-model based calculations of causal spike-signal impulse response functions for finite-sized neuronal network models
ete3
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
dft_pib_code
Interactive Jupyter Notebooks for learning the fundamentals of Density-Functional Theory (DFT)
vofotensors
Bauer, J. K., & Böhlke, T. (2022). Variety of fiber orientation tensors. Mathematics and Mechanics of Solids, 10812865211057602.
labelme
Image Polygonal Annotation with Python (polygon, rectangle, circle, line, point and image-level flag annotation).
argoonlineschool
Here you can find find the source code of the Argo Online school.
kgml_waterbody-area
Using knowledge-guided machine learning to assess patterns of areal change in waterbodies across the contiguous US
geoschem-gcpy
Python toolkit for GEOS-Chem. Contains basic plotting scripts, plus the suite of GEOS-Chem benchmarking utilities.
cocolessons
Course material for the bilingual (Spanish, English) Code to Communicate program.
fathon
fathon: A Python package for a fast computation of detrendend fluctuation analysis and related algorithms - Published in JOSS (2020)
contrabass
Constraint-based model vulnerabilities analysis - Python analysis tool http://contrabass.unizar.es
tsam
Time series aggregation module (tsam). Determines typical operation periods or dereases the temporal resolution. Accelerates model or experiment runs.
pypdf
A pure-python PDF library capable of splitting, merging, cropping, and transforming the pages of PDF files
Cylc
Cylc: A Workflow Engine for Cycling Systems - Published in JOSS (2018)
vptstools
Python library to transfer and convert vertical profile time series data
ccsd
Combinatorial Complex Score-based Diffusion model using stochastic differential equations
https://github.com/catalyst-cooperative/ferc-xbrl-extractor
A tool for converting FERC filings published in XBRL into SQLite databases
https://github.com/sktime/pytorch-forecasting
Time series forecasting with PyTorch
https://github.com/epistasislab/tpot2
A Python Automated Machine Learning tool that optimizes machine learning pipelines using genetic programming.
pennylane
PennyLane is a cross-platform Python library for quantum computing, quantum machine learning, and quantum chemistry. Built by researchers, for research.
pyelli
An open source ellipsometry analysis tool for reproducible and comprehensible building of optical models.
powergenome
A tool to quickly and easily create inputs for power systems models
python-ternary
:small_red_triangle: Ternary plotting library for python with matplotlib
nps-activespace
A Python implementation of observer-based audibility modelling methods
ia-webscraping
An AWS workflow for collecting webpages from the Internet Archive
pymunk
Pymunk is a easy-to-use pythonic 2d physics library that can be used whenever you need 2d rigid body physics from Python
pyhpc-benchmarks
A suite of benchmarks for CPU and GPU performance of the most popular high-performance libraries for Python :rocket:
detectree2
Python package for automatic tree crown delineation based on the Detectron2 implementation of Mask R-CNN
awesome-open-geoscience
Curated from repositories that make our lives as geoscientists, hackers and data wranglers easier or just more awesome
coolpuppy
A versatile tool to perform pile-up analysis on Hi-C data in .cool format.
yggdrasil-decision-forests
A library to train, evaluate, interpret, and productionize decision forest models such as Random Forest and Gradient Boosted Decision Trees.
DifferentialEquations
Multi-language suite for high-performance solvers of differential equations and scientific machine learning (SciML) components. Ordinary differential equations (ODEs), stochastic differential equations (SDEs), delay differential equations (DDEs), differential-algebraic equations (DAEs), and more in Julia.
last-mile-routing-analyzer
lmr-analyzer: A powerful toolkit to analyze the interaction between last mile operations and the street network design.
deepsearch-toolkit
Interact with the Deep Search platform for new knowledge explorations and discoveries
tumoroscope-pymc
Python package of the 'Tumoroscope' model implemented in PyMC.
https://github.com/sparks-baird/self-driving-lab-demo
Software and instructions for setting up and running a self-driving lab (autonomous experimentation) demo using dimmable RGB LEDs, an 8-channel spectrophotometer, a microcontroller, and an adaptive design algorithm, as well as extensions to liquid- and solid-based color matching demos.
ucall
Web Serving and Remote Procedure Calls at 50x lower latency and 70x higher bandwidth than FastAPI, implementing JSON-RPC & REST over io_uring ☎️