https://github.com/broadinstitute/phylogicndt • Rank 6.5 • Science 36%

spice_ev • Rank 6.5 • Science 36%

Simulation Program for Individual Charging Events of Electric Vehicles

OCNet • Rank 9.5 • Science 33%

An R-package to generate and analyze Optimal Channel Networks

adegenet • Rank 19.5 • Science 23%

adegenet: a R package for the multivariate analysis of genetic markers

readbulk • Rank 9.5 • Science 33%

Read and Combine Multiple Data Files

https://github.com/alleninstitute/neuron_morphology • Rank 6.5 • Science 36%

Tools for working with single-neuron morphological reconstructions

aum • Rank 9.5 • Science 33%

brainspace • Rank 16.5 • Science 26%

BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics datasets | available in both Python and Matlab |

technology-carbon-standard • Rank 6.5 • Science 36%

An emerging unifying standard for understanding, quantifying, and reducing carbon emissions from an organisation's technology landscape. A component of a holistic Technology Sustainability Framework.

https://github.com/ctuavastlab/jsongrinder.jl • Rank 6.5 • Science 36%

Machine learning with Mill.jl for JSON documents

ecodata • Rank 6.5 • Science 36%

A data package for reporting on Northeast Continental Shelf ecosystem status and trends.

https://github.com/bertsky/nmalign • Rank 6.5 • Science 36%

forced alignment of lists of string by fuzzy string matching

https://github.com/52north/ogito • Rank 3.5 • Science 39%

OGITO (Open Geospatial Interactive Tool) is a web-based collaborative mapping application

https://github.com/4ment/physher • Rank 3.5 • Science 39%

A multi-algorithmic framework for phylogenetic inference

https://github.com/biocomputingup/strpsearch • Rank 3.5 • Science 39%

rintchron • Rank 3.5 • Science 39%

R Interface to IntChron

https://github.com/cbica/mrisnapshot • Rank 6.5 • Science 36%

A QC tool for verification of datasets with MRI images and derived masks

wasabi • Rank 29.5 • Science 13%

🍣 A lightweight console printing and formatting toolkit

MOFA2 • Rank 19.5 • Science 23%

Multi-Omics Factor Analysis

https://github.com/broadinstitute/bibt-sentinelone • Rank 6.5 • Science 36%

Broad Institute BITS Blue Team repository for bibt-sentinelone PyPI library.

validate • Rank 19.5 • Science 23%

Professional data validation for the R environment

helios • Rank 6.4 • Science 36%

The Helios simulation system is a versatile modeling framework that handles tasks such as managing geometry and associated data structures through a C++ API. Plug-ins build off of the Helios core engine, and access the geometry and data via the Helios context. The sytem comes with a visualization plug-in that can produce stunning renderings of model geometry and data with relatively little effort.

dotenv • Rank 16.4 • Science 26%

Load environment variables from .env in R

https://github.com/fhs/pyhdf • Rank 16.4 • Science 26%

Python wrapper around the NCSA HDF version 4 library

annotationhub • Rank 6.4 • Science 36%

Client for the Bioconductor AnnotationHub web resource

ring • Rank 19.4 • Science 23%

Python cache interface with clean API and built-in memcache & redis + asyncio support.

crew • Rank 16.4 • Science 26%

A distributed worker launcher

https://github.com/astropy/astropy-benchmarks • Rank 6.4 • Science 36%

Benchmarks for the astropy project

https://github.com/cytoscape/cytoscape.github.com • Rank 6.4 • Science 36%

Cytoscape org web site.

PyDynamic • Rank 6.4 • Science 36%

Python library for the analysis of dynamic measurements

https://github.com/bendichter/brokenaxes • Rank 19.4 • Science 23%

Create matplotlib plots with broken axes

https://github.com/google-deepmind/pgmax • Rank 6.4 • Science 36%

Loopy belief propagation for factor graphs on discrete variables in JAX

geoconv • Rank 6.4 • Science 36%

A Python library for end-to-end learning on surfaces. It implements pre-processing functions that include geodesic algorithms, neural network layers that operate on surfaces, visualization tools and benchmarking functionalities.

box • Rank 16.4 • Science 26%

Write reusable, composable and modular R code

atomium • Rank 6.4 • Science 36%

Python macromolecular parsing (with .pdb/.cif/.mmtf parsing and production)

stemmatology • Rank 9.4 • Science 33%

Stemmatological Analysis of Textual Traditions

rdiversity • Rank 9.4 • Science 33%

rdiversity - An R package for measuring similarity-sensitive diversity

proteomics-novice-qfeatures • Rank 1.4 • Science 41%

Introduction to QFeatures, Bioconductor data object for proteomics

internal-fluid-flow-for-gnu-octave • Rank 1.4 • Science 41%

A toolbox for internal fluid flow for GNU Octave

bayesmsm • Rank 6.4 • Science 36%

An R package for Bayesian Marginal Structural Models

fortran • Rank 4.4 • Science 38%

Fortran materials

https://github.com/kupolak/textstat • Rank 16.4 • Science 26%

Ruby gem to calculate statistics from text to determine readability, complexity and grade level of a particular corpus.

https://github.com/cantera/cantera-website • Rank 6.4 • Science 36%

Official Cantera Website

https://github.com/acdh-oeaw/acdh-histogis • Rank 6.4 • Science 36%

acdh-histogis is a python package providing a high level api to interact with HistoGIS

projectfirma • Rank 6.4 • Science 36%

ProjectFirma is Sitka Technology Group's service which builds on the Tahoe Regional Planning Agency's (TRPA) EIP Project Tracker.

https://github.com/baggepinnen/spectraldistances.jl • Rank 6.4 • Science 36%

Measure the distance between two spectra/signals using optimal transport and related metrics

ggcyto • Rank 19.4 • Science 23%

Visualize Cytometry data with ggplot2

https://github.com/dhschall/gem5-fdp • Rank 9.4 • Science 33%

Development repository for Fetch Directed Instruction Prefetching (FDP) in gem5

https://github.com/jeecgboot/jimureport • Rank 16.4 • Science 26%

「数据可视化：报表、大屏、数据看板」积木报表是一款类Excel操作风格，在线拖拽设计的报表工具和和数据可视化产品。功能涵盖: 报表设计、大屏设计、打印设计、图形报表、仪表盘门户设计等，完全免费！秉承“简单、易用、专业”的产品理念，极大的降低报表开发难度、缩短开发周期、解决各类报表难题。

ggmix • Rank 9.4 • Science 33%

fcl • Rank 6.4 • Science 36%

bfw • Rank 9.4 • Science 33%

Framework for conducting Bayesian analyses

IDSL.UFAx • Rank 6.4 • Science 36%

Exhaustive Formula Annotation from ions to formula

https://github.com/google-deepmind/opro • Rank 6.4 • Science 36%

official code for "Large Language Models as Optimizers"

https://github.com/brsynth/rptools • Rank 6.4 • Science 36%

Suite of tools that work on rpSBML format

https://github.com/cornerstonejs/react-cornerstone-viewport • Rank 16.4 • Science 26%

[Deprecated] Use Cornerstone3D Instead https://cornerstonejs.org/

https://github.com/alleninstitute/swdb_2018 • Rank 6.3 • Science 36%

Course materials for the 2018 Summer Workshop on the Dynamic Brain

knitrBootstrap • Rank 19.3 • Science 23%

A framework to create bootstrap styled HTML reports from knitr Rmarkdown.

https://github.com/pdpipe/pdpipe • Rank 16.3 • Science 26%

Easy pipelines for pandas DataFrames.

dotwhisker • Rank 6.3 • Science 36%

Dot-and-Whisker Plots of Regression Results

awips2 • Rank 6.3 • Science 36%

Weather forecasting display and analysis package developed by NWS/Raytheon, released as open source software by Unidata.

emf • Rank 6.3 • Science 36%

Emissions Modeling Framework (EMF)

lmerTest • Rank 19.3 • Science 23%

Repository for the R-package lmerTest

haproh • Rank 9.3 • Science 33%

Software to call ROHs

https://github.com/andreas-bauer/tikz • Rank 3.3 • Science 39%

Collection of my and others TikZ figures

mapfit • Rank 6.3 • Science 36%

R package for PH/MAP fitting

textreuse • Rank 19.3 • Science 23%

Detect text reuse and document similarity

https://github.com/broadinstitute/bibt-qualys • Rank 6.3 • Science 36%

Broad Institute BITS Blue Team repository for bibt-qualys PyPI library.

https://github.com/ami-iit/serial_cpp • Rank 6.3 • Science 36%

Friendly mantained fork of https://github.com/wjwwood/serial .

aea • Rank 16.3 • Science 26%

A framework for autonomous economic agent (AEA) development

https://github.com/arkworks-rs/marlin • Rank 19.3 • Science 23%

A Rust library for the Marlin preprocessing zkSNARK

https://github.com/biaslab/biaslab-hugo • Rank 6.3 • Science 36%

Repository with content of BIASlab website for Hugo static site generator.

amt • Rank 16.3 • Science 26%

permutation • Rank 16.3 • Science 26%

Permutations of finitely many positive integers

https://github.com/sfackler/exponential-decay-histogram • Rank 16.3 • Science 26%

https://github.com/jbrea/mlcourse • Rank 6.3 • Science 36%

react-ardublockly • Rank 6.3 • Science 36%

This repository contains the new senseBox learn- and programming environment powered by google Blockly and React

https://github.com/acts-project/vecmem • Rank 6.3 • Science 36%

Vectorised data model base and helper classes.

epistasis • Rank 9.3 • Science 33%

A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.

https://github.com/broadinstitute/fiss • Rank 19.3 • Science 23%

FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine

dilightnet • Rank 6.3 • Science 36%

Official Code Release for [SIGGRAPH 2024] DiLightNet: Fine-grained Lighting Control for Diffusion-based Image Generation

https://github.com/dpvreony/nucleotide • Rank 16.3 • Science 26%

Code Generation Toolkit for manipulation of POCO objects

awesome-coastal • Rank 6.3 • Science 36%

A curated list of awesome resources for coastal engineers and scientists

roll • Rank 16.3 • Science 26%

Fast and efficient computation of rolling and expanding statistics for time-series data.

https://github.com/amd/esmi_ib_library • Rank 6.3 • Science 36%

E-SMI: EPYC™ System management Interface In-band Library

https://github.com/rveltz/piecewisedeterministicmarkovprocesses.jl • Rank 6.3 • Science 36%

Piecewise Deterministic Markov Processes in Julia

hydrocron • Rank 6.3 • Science 36%

API for retreiving time series of SWOT data

nanosim-h • Rank 9.3 • Science 33%

NanoSim-H: a simulator of Oxford Nanopore reads; a fork of NanoSim.

guidata • Rank 16.3 • Science 26%

Python library generating graphical user interfaces for easy dataset editing and display

https://github.com/aspuru-guzik-group/chimera • Rank 9.3 • Science 33%

Chimera: hierarchy-based multi-objective optimization

BedMachine • Rank 3.3 • Science 39%

Matlab tools for loading, interpolating, and displaying BedMachine ice sheet topography.

sinfnet • Rank 3.3 • Science 39%

A collection of datasets and neural networks for microorganism image classification

https://github.com/cdcgov/measles-model-chicago-2024 • Rank 3.3 • Science 39%

Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Illinois, 2024", MMWR (2024)

linl • Rank 16.3 • Science 26%

Linl Is Not Letter -- Markdown-based LaTeX Letter Template

libpcap • Rank 16.3 • Science 26%

Python binding for the libpcap C library.

https://github.com/chrisgrieser/obsidian-theme-design-utilities • Rank 6.3 • Science 36%

Some utilities and Quality-of-Life features for designers of Obsidian themes.

geocat-datafiles • Rank 6.3 • Science 36%

GeoCAT-datafiles hosts data files used by other GeoCAT packages to test or demonstrate functionality.

kiva • Rank 6.2 • Science 36%

Ground heat transfer calculation tool

sorobn • Rank 6.2 • Science 36%

🧮 Bayesian networks in Python

https://github.com/cgohlke/icsdll • Rank 6.2 • Science 36%

Interface to the image correlation spectroscopy library ICSx64.dll.