https://github.com/laurentrdc/crystals
Data structures, algorithms, and parsing for crystallography
Scarplet
Scarplet: A Python package for topographic template matching and diffusion dating - Published in JOSS (2018)
https://github.com/abelcarreras/dynaphopy
Phonon anharmonicity analysis from molecular dynamics
light-side
⚡️PyTorch Lightning Implementations of Recent Low-Light Image Enhancement !
@stdlib/math-base-special-ellipe
Compute the complete elliptic integral of the second kind.
deeplake
Database for AI. Store Vectors, Images, Texts, Videos, etc. Use with LLMs/LangChain. Store, query, version, & visualize any AI data. Stream data in real-time to PyTorch/TensorFlow. https://activeloop.ai
python-datascientist
Dépôt associé au cours Python pour data scientists (ENSAE 2e année)
robot_descriptions
Access 125+ robot descriptions from the main Python robotics frameworks
@stdlib/stats-base-dmeanpn
Calculate the arithmetic mean of a double-precision floating-point strided array using a two-pass error correction algorithm.
@stdlib/stats-base-nanvariancewd
Calculate the variance of a strided array ignoring NaN values and using Welford's algorithm.
emit-data-resources
This repository provides guides, short how-tos, and tutorials to help users access and work with data from the Earth Surface Mineral Dust Source Investigation (EMIT) mission.
textstat
:memo: python package to calculate readability statistics of a text object - paragraphs, sentences, articles.
@stdlib/blas-ext-base-scusumpw
Calculate the cumulative sum of single-precision floating-point strided array elements using pairwise summation.
molkart
A pipeline for processing Molecular Cartography data from Resolve Bioscience (combinatorial FISH)
snpmatch
A simple python library to identify the most likely strain from the population
apertium-sme-nob
Apertium translation pair for Northern Sámi and Norwegian Bokmål
@stdlib/blas-ext-base-sdssumpw
Calculate the sum of single-precision floating-point strided array elements using pairwise summation with extended accumulation.
pommesdata
A full-featured transparent data preparation routine from raw data to POMMES model inputs
fno-nf.jl
Solving multiphysics-based inverse problems with learned surrogates and constraints
BioPandas
BioPandas: Working with molecular structures in pandas DataFrames - Published in JOSS (2017)
DeepEquilibriumNetworks
Implicit Layer Machine Learning via Deep Equilibrium Networks, O(1) backpropagation with accelerated convergence.
singlem
Novelty-inclusive microbial (and now dsDNA phage) community profiling of shotgun metagenomes
https://github.com/alleninstitute/openscope_databook
OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁🧠🔬🖥️📈
abundancematching
A Python package for subhalo abundance matching (SHAM) with scatter.
@stdlib/blas-ext-base-gsumkbn2
Calculate the sum of strided array elements using a second-order iterative Kahan–Babuška algorithm.
@stdlib/blas-ext-base-dcusumkbn
Calculate the cumulative sum of double-precision floating-point strided array elements using an improved Kahan–Babuška algorithm.
https://github.com/blockresearchgroup/compas_tno
Solvers for finding admissible thrust networks in vaulted masonry structures
anonymouus
Python package to replace identifiable strings in multiple files and folders at once.
https://github.com/bodenmillergroup/steinbock
A toolkit for processing multiplexed tissue images
tongji-undergrad-thesis
:page_facing_up: 同济大学本科生毕业设计论文模板 | Tongji University Undergraduate Thesis Template | Overleaf / Mac / Linux / Windows / Workshop / Docker
seismic-transfer-learning
Deep-learning seismic facies on state-of-the-art CNN architectures
pyprophet
PyProphet: Semi-supervised learning and scoring of OpenSWATH results.
https://github.com/alleninstitute/scrattch.hicat
Hierarchical, iterative clustering for analysis of transcriptomics data in R
@stdlib/stats-base-variancetk
Calculate the variance of a strided array using a one-pass textbook algorithm.
funbiogeo
:package: R package to streamline functional biogeography workflows and provide publication-ready plots
@stdlib/stats-base-dvariancepn
Calculate the variance of a double-precision floating-point strided array using a two-pass algorithm.
coldpool
Cold pool area and temperature data products from eastern Bering Sea, northern Bering Sea, Gulf of Alaska, and Aleutian Islands bottom trawl surveys.
flowio
A Python library for reading and writing Flow Cytometry Standard (FCS) files
@stdlib/blas-ext-base-ssumkbn
Calculate the sum of single-precision floating-point strided array elements using an improved Kahan–Babuška algorithm.
@stdlib/random-streams-box-muller
Create a readable stream for generating pseudorandom numbers drawn from a standard normal distribution using the Box-Muller transform.
DASSL
Solves stiff differential algebraic equations (DAE) using variable stepsize backwards finite difference formula (BDF) in the SciML scientific machine learning organization
paddlevideo
Awesome video understanding toolkits based on PaddlePaddle. It supports video data annotation tools, lightweight RGB and skeleton based action recognition model, practical applications for video tagging and sport action detection.
complexitymeasures.jl
Estimators for probabilities, entropies, and other complexity measures derived from data in the context of nonlinear dynamics and complex systems
@stdlib/stats-base-stdevwd
Calculate the standard deviation of a strided array using Welford's algorithm.
parsnp
Parsnp was designed to align the core genome of hundreds to thousands of bacterial genomes within a few minutes to few hours. Input can be both draft assemblies and finished genomes, and output includes variant (SNP) calls, core genome phylogeny and multi-alignments. Parsnp leverages contextual information provided by multi-alignments surrounding SNP sites for filtration/cleaning, in addition to existing tools for recombination detection/filtration and phylogenetic reconstruction.
deepchem
Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology
@stdlib/stats-base-dmeanstdevpn
Calculate the mean and standard deviation of a double-precision floating-point strided array using a two-pass algorithm.
pheno-ranker-ui
The web ui (R-Shiny application) for Pheno-Ranker, a tool designed for performing semantic similarity analysis on phenotypic data structured in JSON format, such as Beacon v2 Models or Phenopackets v2
@stdlib/blas-ext-base-gapxsumkbn
Add a constant to each strided array element and compute the sum using an improved Kahan–Babuška algorithm.
detectmitigate
Using neural networks to detect effects of rapid climate mitigation
remind2
The remind2 package contains the REMIND-specific routines for data and model output manipulation.
pypro4sail
Python code for running ProspectD and 4SAIL Rasiative Transfer Models
@stdlib/blas-ext-base-gcusumkbn
Calculate the cumulative sum of strided array elements using an improved Kahan–Babuška algorithm.
