tlparser • Science 67%

A CLI tool to parse and analyse temporal logic formulae.

bioimage-analysis-python • Science 44%

Bioimage Analysis with Python

exi.ai-q • Science 44%

Repository for the EXI.AI-Q App prototype.

https://github.com/dineshpinto/data-aggregator • Science 13%

A high performance solution to analysing millions of incoming data points using JIT, vectorisation and C arrays.

kgraph-ts • Science 67%

Graph Embedding for Interpretable Time Series Clustering

https://github.com/dineshpinto/cryptomemebot • Science 13%

A friendly bot that pulls the top memes from r/cryptocurrencymemes and posts them to your telegram group. Also integrates a machine learning chatbot.

rcpchgrowth • Science 52%

A python package to produce calculations for all growth issues

https://github.com/cea-metrocarac/pysspfm • Science 26%

PySSPFM: A specialized tool for Switching Spectroscopy Piezoresponse Force Microscopy (SSPFM) data processing

i4-0-client-py • Science 44%

TAO71 I4.0 is an AI created by TAO71 in Python.

https://github.com/cemac/stormtrackingscripts • Science 10%

THIS REPO IS ARCHIVED. Development of Scripts from ICAS dynamics group

eu-zevam • Science 57%

This repository presents a European passenger car stock model. It allows to model the future powertrain composition of the European vehicle fleet under different scenarios. It also presents different sensitivity analysis performed. This code is used to analyze the European BEV stock fleet up to 2050.

citation • Science 44%

Generate bibtex entries from Document Object Identifiers (DOI)

2022-01-18-cardiff-online • Science 18%

Shell, Git, Plotting and Programming in Python (Cardiff, January 2022)

https://github.com/andreasvc/roaringbitmap • Science 23%

Roaring Bitmap in Cython

streamad • Science 67%

Online anomaly detection for data streams/ Real-time anomaly detection for time series data.

https://github.com/bird-house/eggshell • Science 26%

Utilities common to multiple WPS birds.

twitter-with-twarc • Science 44%

Introduction to Harvesting Twitter Data with Twarc

webbpsf • Science 13%

James Webb Space Telescope PSF simulation tool - NOTE THIS VERSION OF REPO IS SUPERCEDED BY spacetelescope/webbpsf

algepy-tools • Science 31%

A Python library for efficient number theory and abstract algebra.

https://github.com/bgeedb/bgee_pipeline • Science 49%

Source code of the Bgee pipeline used to build the Bgee database

https://github.com/anilbey/gmql-learn • Science 13%

Genomic Space based Machine Learning for GMQL

SpectriPy — Peer-reviewed • Science 98%

SpectriPy: Enhancing Cross-Language Mass Spectrometry Data Analysis with R and Python - Published in JOSS (2025)

https://github.com/baharmon/landscape_evolution • Science 23%

A short term landscape evolution using a path sampling method to solve water and sediment flow continuity equations and model mass flows over complex topographies.

itk-cleaver • Science 36%

Wrapper for Cleaver to use as an ITK filter

agrum • Science 26%

This repository is a mirror. If you want to raise an issue or contact us, we encourage you to do it on Gitlab (https://gitlab.com/agrumery/aGrUM).

starplot • Science 44%

✨ Star charts and maps in Python

gfi-bot • Science 31%

[Working in Progress] ML-powered 🤖 for finding and labeling good first issues in your GitHub project!

oakville-land-use-classification • Science 44%

Optimizing Deep Learning Models for Classifying Urban Land Cover.

quacc • Science 67%

quacc is a flexible platform for computational materials science and quantum chemistry that is built for the big data era.

gufo_acme • Science 44%

Gufo ACME is a Python asyncio client for the ACME protocol.

https://github.com/biswajitsahoo1111/machine_learning_regression_and_optimization • Science 10%

This repository contains code examples supplementing the paper titled "Machine Learning, Regression, and Optimization".

Pore2Chip — Peer-reviewed • Science 98%

Pore2Chip: All-in-one python tool for soil microstructure analysis and micromodel design - Published in JOSS (2025)

SSAPy - Space Situational Awareness for Python — Peer-reviewed • Science 100%

SSAPy - Space Situational Awareness for Python - Published in JOSS (2025)

citation-network-app • Science 44%

An interactive web app that fetches the top 20 related papers from Google Scholar (via SerpAPI), builds a citation graph, and renders it in pages of 10 nodes each.

pcmdi_metrics • Science 85%

Open-source Python package for Systematic Evaluation of Climate and Earth System Models

python-socialsci • Science 57%

Data Analysis and Visualization with Python for Social Scientists

torch-kde • Science 67%

A differentiable implementation of kernel density estimation in PyTorch.

chmap • Science 67%

A python package focused on the detection, mapping, tracking, and general analysis of coronal holes in the solar corona.

Pyra — Peer-reviewed • Science 98%

Pyra: Automated EM27/SUN Greenhouse Gas Measurement Software - Published in JOSS (2023)

doenermann-bot • Science 26%

A Repository with the Dönermann Discord Bot

protein-interaction-networks-graph • Science 44%

Serotonin pathways interaction networks

https://github.com/cardiacmodelling/markov-builder • Science 13%

Tool for building and manipulating Markov models of ion-channel kinetics

https://github.com/arfc/transition-scenarios • Science 26%

A repository to hold transition scenarios with Cyclus.

Jabberwocky — Peer-reviewed • Science 93%

Jabberwocky: an ontology-aware toolkit for manipulating text - Published in JOSS (2020)

insect-detect-ml • Science 67%

Notebooks for detection and classification model training. Insect classification model. Python scripts for processing of data, collected with the Insect Detect DIY camera trap.

eda_in_python_book • Science 67%

Data7 Exploratory Data Analysis in Python Book

https://github.com/astropenguin/jupyter-launcher • Science 13%

:rocket: Application for macOS to open *.ipynb in the Jupyter Notebook

rl-based-adaptive-classifier • Science 57%

Deep Reinforcement Learning based adaptive time-series binary classifier.

https://github.com/awslabs/amazon-emr-vscode-toolkit • Science 13%

A VS Code Extension to make it easier to manage and develop Spark jobs on EMR

https://github.com/becksteinlab/hollow • Science 13%

Fork of Bosco Ho's and Franz Gruswitz's HOLLOW 1.1 (see http://hollow.sourceforge.net/).

https://github.com/axect/scientific_bench • Science 26%

Benchmark some scientific computations for various languages & libraries

chemfetchtool • Science 67%

ChemFetchTool is a web-based tool employing the PubChem PUG REST API endpoint for automated retrieval of molecular properties given only the compound name(s)

jupyter_gettingstarted2ml • Science 67%

This Getting Started Tutorial systematically demonstrates the typical ML work process step-by-step using the powerful and performant Support Vector Classifier (SVC) and the beginner-friendly Iris Dataset. Furthermore, the selection of the correct SVC kernel and its parameters are described and their effects on the classification result are shown.

predictor-api-client • Science 44%

Predictor API client-side application for prediction (RESTful API for predictions via trained models identified by unique IDs)

https://github.com/chilipp/psyplot-ak-viewer-workshop-20210412 • Science 13%

Presentation material for the psyplot demonstration at the Datahub AK Viewer workshop

quant-geom-machine-learning • Science 57%

https://github.com/datejada/intro-python-business-analytics • Science 26%

Notebooks for learning basic python concepts to apply in business analytics

https://github.com/bluebrain/blueetl-core • Science 57%

Core transformations for BlueETL

llms-from-scratch • Science 44%

Implement a ChatGPT-like LLM in PyTorch from scratch, step by step

bout-dev • Science 67%

BOUT++: Plasma fluid finite-difference simulation code in curvilinear coordinate systems

redundans • Science 49%

Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

https://github.com/cbg-ethz/shm • Science 26%

Deep hierarchical models combined with Markov random fields.

pyrocko • Science 57%

An official read-only mirror of https://git.pyrocko.org/pyrocko/pyrocko. A seismology toolkit for Python.

pyorganoid • Science 67%

A Python package for the simulation of organoids for the purpose of studying Organoid Intelligence (OI) and Organoid Learning (OL).

https://github.com/bonelesswater/neural_network • Science 26%

Custom neural network implementation from scratch

hierarchical_nu • Science 44%

A Bayesian hierarchical model for source-nu associations

pronunciation-dictionary • Science 67%

Library and CLI to load/save/modify pronunciation dictionaries.

macapype • Science 44%

PNH segmentation pipelines based on nipype

https://github.com/ccao-data/model-sales-val • Science 13%

Heuristics for detecting outlier and non-arms-length sales

ngclearn • Science 67%

NGC-Learn: Neurobiological Systems Design and Simulation in Python

https://github.com/cedergrouphub/materialparser • Science 23%

Utility to compile string of chemical terms into data structure with chemical formula and composition

https://github.com/cemac/comet_volcdb • Science 36%

Code for COMET Volcano Database Web App

qiskit-addon-cutting • Science 67%

Reduce width and depth of quantum circuits by cutting gates and wires.

tropess-notes-python • Science 54%

Python code for the TROPESS Notes book

https://github.com/callat-qcd/project_ga • Science 23%

Isovector nucleon axial coupling

mlpro-test-center • Science 75%

MLPro Test Center – Howtos and benchmarking tools for MLPro components and algorithms

https://github.com/compas-dev/compas_robots • Science 26%

Basic infrastructure for working with robots in COMPAS.

https://github.com/charmplusplus/charm4py • Science 26%

Parallel Programming with Python and Charm++

https://github.com/computecanada/wheels_builder • Science 26%

DRAC's wheels scripts

https://github.com/anananacr/bblib • Science 44%

beambusters library

zx • Science 26%

ZX Spectrum emulator in Python and C++

agweather-qaqc — Peer-reviewed • Science 100%

agweather-qaqc: An Interactive Python Package for Quality Assurance and Quality Control of Daily Agricultural Weather Data and Calculation of Reference Evapotranspiration - Published in JOSS (2024)

https://github.com/choderalab/ensembler • Science 13%

Automated omics-scale protein modeling and simulation setup.

pycottas • Science 49%

Python COTTAS library for compressing and querying RDF

image-processing-based-motion-sensing-with-telegram • Science 67%

Final Project

skltest • Science 44%

Python library to compare the performance obtained by models available in Scikit-learn to solve regression and classification problems. It is possible to evaluate the influence of successive resampling and optimize the hyperparameters through a K-fold cross-validation holdout.

gr-adapt • Science 44%

Adaptive filters for GNU Radio

annodash • Science 67%

[JAMIA Open] A clinical terminology annotation dashboard created using Plotly Dash & the MIMIC-IV database.

mpia-python-template • Science 54%

Python template for new projects.

mri_k-space-derived_details_edges • Science 67%

k-space based details/edges detection in MRI images with optional k-space based denoising and detail control (on the example of Agilent FID data). (Python 3)

panelsplit • Science 67%

A tool for performing cross-validation with panel data

araucana-xai • Science 67%

Tree-based local explanations of machine learning model predictions

sds_env • Science 54%

Spatial Data Science Environment

p2108-python • Science 54%

Python wrapper for U.S. Reference Software Implementation of Recommendation ITU-R P.2108

latte • Science 67%

Latte: Cross-framework Python Package for Evaluation of Latent-based Generative Models

spectools • Science 67%

A collection of astronomical spectrum reduction and processing scripts.

py-rse • Science 44%

Research Software Engineering with Python course material

https://github.com/czs108/microsoft-malware-classification • Science 10%

🔍 "2015 Microsoft Malware Classification Challenge" - Using machine learning to classify malware into different families based on Windows PE structures, disassembly scripts and machine code.

marxs • Science 85%

Multi-Architecture-Raytrace-Xraymission-Simulator

hood • Science 44%

A firewall system for working in unsafe environments.