https://github.com/cemac/swiftdb
THIS REPO IS ARCHIVED. Repository for the AfricanSWIFT Project Management Tool
https://github.com/akorkos/numerical-methods
Numerical methods made with Python
behavython
To be used in conjunction with Bonsai-RX to extract behavior from video
private-pgd
Implementation for the paper "Privacy-preserving data release leveraging optimal transport and particle gradient descent"
modular-diffusion
Python library for designing and training your own Diffusion Models with PyTorch
pipelines
Custom JWST reduction pipelines for NIRSpec and MIRI Solar System observations
hybrid-pre-doc2vec-doc-relevance
Hybrid approach combining dictionary-based NER and doc2vec
https://github.com/amanchokshi/non-normal
Generate non-normal distributions with given a mean, variance, skewness and kurtosis with python
local-python-code-protector
The Local Python Code Protector Script is a command-line tool designed to provide source code protection and secure code sharing for Python scripts. It allows developers to obfuscate their Python code. This script supports both Python source files (.py) and compiled Python files (.pyc), offering flexible options for code obfuscation and encryption.
brski-py
A "Bootstrapping Remote Secure Key Infrastructure" (BRSKI) Demonstrator in Python
qiskit-addon-cutting
Reduce width and depth of quantum circuits by cutting gates and wires.
madys
MADYS: isochronal parameter determination for young stellar and substellar objects
stochasticantibiotic
A Stochastic Programming Approach to the Antibiotics Time Machine Problem
https://github.com/compas-dev/compas_robots
Basic infrastructure for working with robots in COMPAS.
https://github.com/ankit7540/raman-intensity-approxmn-test
Python module implementing the collocation method for 1D ro-vibrational Schroedinger equation. This repo also includes datasets on ro-vibrational wavefunctions and polarizabilities of 12 diatomic molecules.
https://github.com/amr-yasser226/customer-churn-prediction
End-to-end customer churn prediction project: dataset preparation, experiments with scikit-learn, model tracking with MLflow, data versioning (DVC), CI/CD, and deployment examples.
https://github.com/ampliconsuite/ampliconreconstructorom
Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data
https://github.com/aidinhamedi/python-cli-toolkit
This Python CLI Toolkit is a powerful tool for creating command-line interfaces (CLI) with Python. It provides a framework for defining commands, handling user input, and managing modules.
https://github.com/aidinhamedi/python-color-print-v2
A simple and user friendly way to print colored text to the console.
https://github.com/ai4trees/deepforest-finetuning
Fine-tuning of the DeepForest model for tree detection in aerial imagery
https://github.com/agormp/sequencelib
Library for analyzing and manipulating DNA and protein sequences
https://github.com/openchemistry/tomviz
Cross platform, open source application for the processing, visualization, and analysis of 3D tomography data
https://github.com/kmnhan/erlabpy
Complete python workflow for Angle-Resolved Photoemission Spectroscopy (ARPES)
https://github.com/seixasgroup/carcara
Towards Explainable, Scalable, and Accurate Machine-Learned Interatomic Potentials
https://github.com/yutsuro/pytorch-time-series-classification
Simple model creation for time series classification in Pytorch
https://github.com/andrei-vataselu/data-science-snippets
🧰 Essential EDA and Data Cleaning Helpers for Any DataFrame This collection of functions is designed to accelerate exploratory data analysis (EDA), quickly surface data quality issues, and offer high-level insights into the structure and content of your dataset.
complexity-in-complexity
Code for "Complexity in Complexity: Understanding Visual Complexity Through Structure, Color, and Surprise". CogSci, 2025 & ICLR Re-Align Workshop, 2025.
https://github.com/fernandezfran/lithiation_protocol
Lithiation of amorphous silicon protocol
https://github.com/agoose77/throttlestop
Simple tool to manage thermal behaviour on Linux
python-package-best-practices
Hands-on workshop showing good software development practices to create a Python package.
agweather-qaqc
agweather-qaqc: An Interactive Python Package for Quality Assurance and Quality Control of Daily Agricultural Weather Data and Calculation of Reference Evapotranspiration - Published in JOSS (2024)
https://github.com/afd-illinois/pyharm
Python tools for HARM simulation analysis
vuegen
VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications. Users simply provide a directory with output files and VueGen compiles them into a structured report.
jupyterlabpymolpysnips
Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.
datatoolkit
A collection of tools for visualization and data processing for exploratory data analysis.
pymbe
pyMBE provides tools to facilitate building up molecules with complex architectures in the Molecular Dynamics software ESPResSo. For an up-to-date API documention please check our website:
py-horned-owl
A library for Web Ontology Language in Python created using a bridge from horned-owl to python using PyO3.
rnaseq_pipeline
RNA-seq Data Processing, Quantification and Annotation Snakemake Workflow and MrBiomics Module.
short-unique-id
Tiny, dependency-free Snowflake-style & short random ID generator for Python 3
https://github.com/adamouization/solar-irradiance-forecasting
Predicting short-term solar irradiance using deep learning and statistical methods on the Folsom dataset
symforce
Fast symbolic computation, code generation, and nonlinear optimization for robotics
btllib
btllib: A C++ library with Python interface for efficient genomic sequence processing - Published in JOSS (2022)
python-ags4
python-ags4: A Python library to read, write, and validate AGS4 geodata files - Published in JOSS (2022)
https://github.com/adamouization/python-machine-learning-data-science-notes
:orange_book: Jupyter notebooks containing useful Python code and notes for general Machine Learning and Data Science projects.
https://github.com/adamouization/formula1-crash-stats
:car: :collision: :car: Flask web application parsing F1 DNF stats from Wikipedia and visualising them in charts and tables.
rabpro
rabpro: global watershed boundaries, river elevation profiles, and catchment statistics - Published in JOSS (2022)
https://github.com/adamouization/code-in-place-2023
My slides and code solutions for the 2023 edition of the Stanford Code in Place online course.
fhir-pyrate
FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured information as pandas DataFrames. It can also be used to filter resources using RegEx and SpaCy and download DICOM studies and series.
amuse
Astrophysical Multipurpose Software Environment. This is the main repository for AMUSE
https://github.com/actinia-org/actinia-statistic-plugin
This actinia plugin is designed for computing raster map and raster-time-series statistics for categorical and continuous data
sqs_substitution_tool
Python tool for random atomic substitution and SQS generation in MOF-like frameworks
heterogeneous-multi-agent-systems
Research project about heterogeneous multi-agent systems.
machine-learning-novice-sklearn
A Carpentry style lesson on machine learning with Python and scikit-learn.
https://github.com/acclab/dabest-python
Data Analysis with Bootstrapped ESTimation
stadyna
StaDynA: Addressing the Problem of Dynamic Code Updates in the Security Analysis of Android Applications
30daymapchallengeqgisperu
Mapatón orientada a compartir mapas temáticos diversos por cada día del mes, empleando software libre de código abierto.
briscolabot
Reinforcement Learning agent that plays Briscola, a famous Italian card game
movie-recommendation-chatbot
Movie Recommendation Chatbot provides information about a movie like plot, genre, revenue, budget, imdb rating, imdb links, etc. The model was trained with Kaggle’s movies metadata dataset. To give a recommendation of similar movies, Cosine Similarity and TFID vectorizer were used. Slack API was used to provide a Front End for the chatbot. IBM Watson was used to link the Python code for Natural Language Processing with the front end hosted on Slack API. Libraries like nltk, sklearn, pandas and nlp were used to perform Natural Language Processing and cater to user queries and responses.
precooltool
an online web application that enables you simulate solar pre-cooling for a range of exsiting buildings in Australian building stock.
https://github.com/bamresearch/sequentiallearningapp
Sequential Learning App for Materials Discovery (SLAMD)
opennews
OpenNews is a REST API made in Python to extract news from Portuguese journals. It is intended for academic use.
powerfit-em
Rigid body fitting of atomic strucures in cryo-electron microscopy density maps
sachau-2022-icesheet
jupyter-book-nfdi4biodiversity
Public repository for the Jupyter book (original repository: https://gitlab.hrz.tu-chemnitz.de/ioer/fdz/jupyter-book-nfdi4biodiversity) with training material on how to connect to the IOER Monitor API and the GBIF Database API to query and process spatial data.
https://github.com/btschwertfeger/infinity-grid
Multi-Exchange Infinity Grid Trading Bot
propulate
Propulate is an asynchronous population-based optimization algorithm and software package for global optimization and hyperparameter search on high-performance computers.
pricepoints
Price Points research, data analyses, and packages. Informational only, not official Turquoise Health products