https://github.com/baharmon/landscape_evolution • Science 23%

A short term landscape evolution using a path sampling method to solve water and sediment flow continuity equations and model mass flows over complex topographies.

movement • Science 44%

Mesh movement methods for finite element problems solved using Firedrake

agrum • Science 26%

This repository is a mirror. If you want to raise an issue or contact us, we encourage you to do it on Gitlab (https://gitlab.com/agrumery/aGrUM).

starplot • Science 44%

✨ Star charts and maps in Python

hngin • Science 44%

An attempt to implement a 3D rendering engine based on pure intuition and my knowledge of linear algebra

deepfastvision • Science 13%

A Python library for rapid prototyping of deep transfer learning vision models.

https://github.com/data-miner00/spark • Science 26%

A laboratory to carry out experiments with PySpark

macro • Science 67%

[ICC '21] MACRO: Megastructure Assembly via Collaborative Robots in Orbits

commonmeta-py • Science 67%

Documentation

gufo_acme • Science 44%

Gufo ACME is a Python asyncio client for the ACME protocol.

https://github.com/biswajitsahoo1111/machine_learning_regression_and_optimization • Science 10%

This repository contains code examples supplementing the paper titled "Machine Learning, Regression, and Optimization".

jigsaw • Science 13%

A plugin framework for Python.

eeg-pyline • Science 67%

EEG-pyline is a pipeline for EEG data pre-processing, analysis and visualisation created for neuroscience and mental health research.

waterbody-detection-via-deep-learning • Science 67%

Source code for the paper, "Water Body Extraction from Sentinel-2 Imagery with Deep Convolutional Networks and Pixelwise Category Transplantation".

pcmdi_metrics • Science 85%

Open-source Python package for Systematic Evaluation of Climate and Earth System Models

prescripty • Science 44%

Early version of Scripty during development.

slicer • Science 77%

Multi-platform, free open source software for visualization and image computing.

speclite • Science 67%

Lightweight utilities for working with spectroscopic data

sp2024-election-analysis • Science 44%

📊 An analysis of voting patterns in São Paulo's 2024 elections, focusing on voter behavior, absenteeism, and geographic trends.

https://github.com/capjamesg/asset-manager • Science 26%

A Python asset wrapper that converts images to webp on the fly for improved performance.

corpusama • Science 44%

A language corpus creation tool for ReliefWeb

iscanvcfmerge • Science 23%

Python tool to merge cross-species Illumina iScan genotype data with a reference set of genotypes from a pre-existing source.

agilerl • Science 54%

Streamlining reinforcement learning with RLOps. State-of-the-art RL algorithms and tools, with 10x faster training through evolutionary hyperparameter optimization.

scikit-plots • Science 67%

An intuitive library that seamlessly adds plotting capabilities and functionality to any model objects or outputs, compatible with tools like scikit-learn, XGBoost, TensorFlow, and more.

tessilator • Science 54%

An all-in-one program to get TESS lightcurves and rotation periods

Pyra — Peer-reviewed • Science 98%

Pyra: Automated EM27/SUN Greenhouse Gas Measurement Software - Published in JOSS (2023)

pywatershed • Science 39%

A hydrologic model in Python

openlidarmap • Science 67%

Zero-Drift Point Cloud Mapping using Map Priors

blendernerf • Science 44%

Easy NeRF synthetic dataset creation within Blender

dimet • Science 65%

Differential analysis of targeted Isotope-labeled Metabolomics data

marine_qc • Science 49%

Marine Quality Control toolbox

https://github.com/cardiacmodelling/markov-builder • Science 13%

Tool for building and manipulating Markov models of ion-channel kinetics

https://github.com/arfc/transition-scenarios • Science 26%

A repository to hold transition scenarios with Cyclus.

Jabberwocky — Peer-reviewed • Science 93%

Jabberwocky: an ontology-aware toolkit for manipulating text - Published in JOSS (2020)

turtleFSI — Peer-reviewed • Science 49%

turtleFSI: A Robust and Monolithic FEniCS-based Fluid-Structure Interaction Solver - Published in JOSS (2020)

fastcore • Science 26%

Python supercharged for the fastai library

amep • Science 39%

The Active Matter Evaluation Package (AMEP) - a Python library for the analysis of particle-based and continuum simulation data of soft and active matter systems

msannika_csm_annotation • Science 65%

Calculates Intensities of Cross-linked Peptides from MS Annika CSMs.

spiderweb • Science 44%

Web Interface for DXSpider hamradio cluster

hood • Science 44%

A firewall system for working in unsafe environments.

futurecoord • Science 52%

Model-based AI approach for network and service coordination leveraging uncertain traffic forecasts

codefree • Science 44%

CodeFree: Make no code a reality.

python-lab-automation-landscape • Science 54%

A catalog/overview of Python packages in the area of lab automation.

easymcdm • Science 54%

Multiple-criteria decision-making (MCDM) with Electre, Promethee, Weighted Sum and Pareto

automatedfreesurfer • Science 44%

https://github.com/czs108/microsoft-malware-classification • Science 10%

🔍 "2015 Microsoft Malware Classification Challenge" - Using machine learning to classify malware into different families based on Windows PE structures, disassembly scripts and machine code.

https://github.com/bbarclay/resonance-guided-search • Science 26%

A novel heuristic framework for pathfinding and optimization based on adaptability in conserved systems

https://github.com/augustunderground/pyal • Science 13%

Python parser for MCNC benchmark netlists

https://github.com/austinjhunt/ibew-data-scraper • Science 26%

Automation of merged data collection and cleaning from ibew.org and unionfacts.com for an Upwork job.

python_template • Science 44%

A template repository for linting, testing, GUI building and dockerizing python scripts.

pelc • Science 75%

Python Eplet Load Calculator

pypackage-skeleton • Science 44%

The automatic build of the @12rambau/pypackage copier template :ledger:

gecko-syndata • Science 44%

Python library for the generation and mutation of realistic personal identification data at scale

influence-model • Science 57%

A Python implementation of the influence model, a generative model that describes the interactions between networked Markov chains

https://github.com/avapolzin/rahrah • Science 49%

University-inspired matplotlib color palettes and colormaps.

mfte • Science 57%

MFTE (Multi Feature Tagger of English) Python is the Python version based on Le Foll's MFTE written in Perl. It is extended to include semantic tags from Biber (2006) and Biber et al. (1999), including other specific tags.

thermomag_plotter • Science 67%

A basic Python script to plot thermomagnetic data. Made as an exercise for GLY6932 (Data and Software) at University of Florida.

py-rse • Science 44%

Research Software Engineering with Python course material

https://github.com/awslabs/amazon-emr-vscode-toolkit • Science 13%

A VS Code Extension to make it easier to manage and develop Spark jobs on EMR

3d-powergrid-inspection • Science 44%

This repository contains the code developed for my MSc project titled "Exploring Photogrammetry for High-Fidelity 3D Model Generation: A Power Grid Inspection Study", as well as some of the results. The thesis was written in collaboration with SINTEF, and the degree issued by DTU. The full thesis can be downloaded from the below link.

coda • Science 44%

Code Analysis Toolkit

lstar • Science 44%

Python implementation of lstar automata learning algorithm.

gazelle • Science 44%

A Fast Engine for Structural Engineering.

swelling_tablet_fronts_d_k_from_mri_t2_or_img • Science 49%

Tool for calculating swelling tablet eroding front's diffusion rate D and the rate of the swelling k from time series of either T2-maps or MRI images in FDF or Text Image format. (Python 3)

pyhdb • Science 67%

pyHDB - Ferramenta de auxílio metodológico para pesquisas na interface da Hemeroteca Digital Brasileira da Biblioteca Nacional. Desenvolvida por Eric Brasil (IHLM-UNILAB) como parte de pesquisa acadêmica da área de História Digital.

https://github.com/alan-turing-institute/intro-to-transparent-ml-course • Science 13%

An Introduction to Transparent Machine Learning

skltest • Science 44%

Python library to compare the performance obtained by models available in Scikit-learn to solve regression and classification problems. It is possible to evaluate the influence of successive resampling and optimize the hyperparameters through a K-fold cross-validation holdout.

https://github.com/cea-metrocarac/pysspfm • Science 26%

PySSPFM: A specialized tool for Switching Spectroscopy Piezoresponse Force Microscopy (SSPFM) data processing

image-processing-based-motion-sensing-with-telegram • Science 67%

Final Project

textcase • Science 44%

Python library for text case conversions

https://github.com/andleb/aoc18 • Science 13%

Advent of Code 2018 solutions to all problems - actual competition code.

nabla • Science 44%

Scientific Computing in Python 🐍 with Mojo 🔥 acceleration

jaxngp • Science 44%

JAX implementation of instant-ngp (NeRF part)

insect-detect • Science 67%

Detection models and Python scripts for automated insect monitoring with the Insect Detect DIY camera trap.

build123d • Science 67%

A python CAD programming library

https://github.com/andreasvc/roaringbitmap • Science 23%

Roaring Bitmap in Cython

streamad • Science 67%

Online anomaly detection for data streams/ Real-time anomaly detection for time series data.

MiTfAT — Peer-reviewed • Science 100%

MiTfAT: A Python-based Analysis Tool for Molecular fMRI Experiments. - Published in JOSS (2021)

RivGraph — Peer-reviewed • Science 59%

RivGraph: Automatic extraction and analysis of river and delta channel network topology - Published in JOSS (2021)

rabpro — Peer-reviewed • Science 100%

rabpro: global watershed boundaries, river elevation profiles, and catchment statistics - Published in JOSS (2022)

https://github.com/copasi/python-copasi-testsuite • Science 26%

Python COPASI testing

python-ags4 — Peer-reviewed • Science 89%

python-ags4: A Python library to read, write, and validate AGS4 geodata files - Published in JOSS (2022)

btllib — Peer-reviewed • Science 98%

btllib: A C++ library with Python interface for efficient genomic sequence processing - Published in JOSS (2022)

https://github.com/choderalab/ensembler • Science 13%

Automated omics-scale protein modeling and simulation setup.

SpectriPy — Peer-reviewed • Science 98%

SpectriPy: Enhancing Cross-Language Mass Spectrometry Data Analysis with R and Python - Published in JOSS (2025)

agweather-qaqc — Peer-reviewed • Science 100%

agweather-qaqc: An Interactive Python Package for Quality Assurance and Quality Control of Daily Agricultural Weather Data and Calculation of Reference Evapotranspiration - Published in JOSS (2024)

COHESIVM — Peer-reviewed • Science 98%

COHESIVM: Combinatorial h+/e- Sample Investigation using Voltaic Measurements - Published in JOSS (2025)

pengWann — Peer-reviewed • Science 98%

pengWann: Descriptors of chemical bonding from Wannier functions - Published in JOSS (2025)

itk-cleaver • Science 36%

Wrapper for Cleaver to use as an ITK filter

EXP — Peer-reviewed • Science 98%

EXP: a Python/C++ package for basis function expansion methods in galactic dynamics - Published in JOSS (2025)

PathSim - A System Simulation Framework — Peer-reviewed • Science 98%

PathSim - A System Simulation Framework - Published in JOSS (2025)

zx • Science 26%

ZX Spectrum emulator in Python and C++

wilson • Science 23%

A Python package for the running and matching of Wilson coefficients above and below the electroweak scale

oscillation-adaptability • Science 44%

🔄 Discover how oscillations emerge as a mathematical necessity in complex systems. A rigorous framework proving C+A=1 with 10^-16 precision. 📊 Visualize adaptability landscapes & spectral fingerprints.

complexity-in-complexity • Science 54%

Code for "Complexity in Complexity: Understanding Visual Complexity Through Structure, Color, and Surprise". CogSci, 2025 & ICLR Re-Align Workshop, 2025.

gfi-bot • Science 31%

[Working in Progress] ML-powered 🤖 for finding and labeling good first issues in your GitHub project!

introduction-to-conda-for-data-scientists • Science 31%

Introduction to Conda for (Data) Scientists

astroariadne • Science 28%

Easy stellar SED fitting!

grikod • Science 67%

İkili sayıları Gri Koda çevirir. Grikod converts binary numbers to Gray Code.

fast_frechet-python • Science 44%

Comparison of different (fast) discrete Fréchet distance implementations in Python.