collocation-method hacktoberfest iterative-methods multigrid ordinary-differential-equations parallel-computing parallel-in-time partial-differential-equations pfasst python spectral-deferred-corrections

graph-algorithms machine-learning natural-language natural-language-processing nlp python spacy spacy-extension summarization textgraphs textrank

augmentation deep-learning detection fast-augmentations image-augmentation image-classification image-processing image-segmentation machine-learning object-detection python segmentation

forward-kinematics inverse-kinematics library model-predictive-control nonlinear optimal-control optimization planning python robotics task-specification trajectory-optimization

anomaly-detection dask data-science matrix-profile motif-discovery numba pattern-matching pydata python time-series-analysis time-series-data-mining time-series-segmentation

Artificial Intelligence and Machine Learning

datajoint electrophysiology kachery neuroscience nwb python sortingview spikeinterface

bioinformatics linter linting nextflow nf-core pipeline python workflow

android ekf gnss navigation position pseudorange python residual wls

bioinformatics python

ai artificial-intelligence data-science deep-learning machine-learning python pytorch

biological-simulations brian brian2 code-generation computational-neuroscience differential-equations gpu gpu-acceleration neuroscience python science simulation simulation-framework spiking-neural-networks

hydrodynamic-modeling python python-interface schism-model

complex-networks complex-neural-networks complex-numbers deep-learning machine machine-learning neural-networks python tensorflow

caching memoization multiprocessing parallel-computing python threading

advanced-scientific-data-format asdf data-format iso-9692-1 opendata python welding welding-community weldx

data-analysis earth-science grib iris meteorology netcdf oceanography python spaceweather visualisation

analysis-framework pedestrian python science-research

arima autoregressive-forecasting backtesting-forecasters data-science direct-forecasting exogenous-predictors forecasting lightgbm lstm-neural-networks machine-learning multi-series-forecasting multi-step-forecasting multiple-time-series-forecasting probabilistic-forecasting python quantile-forecasting sarimax scikit-learn time-series xgboost

ascom astronomy astropy automation observatory python

analysis-ready-data earth-observation eumetsat gpm jaxa nasa noaa open-data passive-microwave precipitation python radar rainfall reflectivity remote-sensing reproducible-research satellite-data snowfall trmm xarray

dataset fake fake-data faker faker-generator python test-data test-data-generator testing

Agricultural and Biological Sciences (40%)

hamiltonian-monte-carlo hmc hybrid-monte-carlo inference-algorithms markov-chain-monte-carlo mcmc python

audio dsp librosa music python scipy

bayesian-inference bayesian-statistics python regression-models statistical-analysis statistical-modeling

d3 dashboard declarative graph-library interactive jupyter-notebook plotly plotly-dash plotlyjs python regl sparkles visualization webgl

astronomy astrophysics cosmology hacktoberfest python simulations

autocorrelation autograd automatic-differentiation condensed-matter correlation data-analysis error-propagation lattice-field-theory lattice-gauge-theory lattice-qcd markov-chain monte-carlo particle-physics physics python qcd statistical-analysis statistical-mechanics

clusterless hippocampus python replay sorted-spikes state-space-model

atmospheric-science hacktoberfest python python3 science

analytical-derivatives automatic-differentiation c-plus-plus casadi code-generation conda cppad dynamics fcl kinematics motion-planning pinocchio python rigid-body-dynamics robotics ros urdf

crs depots electrification elr elr-codes elr-mileage line-name lor nlc python rail railway-codes railways signal-boxes stanox stations tiploc tunnels uk-railway viaducts

python

optimal-asset-allocations optimization portfolio python pytorch quantum-algorithms qubo simulated-bifurcation-algorithm

bmi csdms modeling permafrost python

integration-testing python

expanded-ensembles free-energy-perturbation molecular-design molecular-dynamics openmm python relative-free-energy simulation

arxiv-api bibtex cli crossref-api dblp-api openalexapi python research rest-api scraper script semantic-scholar terminal unpaywall

benchmarking command-line-tool energy energy-monitor hpc mpi python

astronomy data-analysis deshima python spectroscopy submillimeter

bioinformatics computational-biology deep-learning dgl drug-discovery gene-regulatory-networks geometric-deep-learning graph-neural-networks interactome interactomics ppi-networks protein protein-data-bank protein-design protein-structure python pytorch pytorch-geometric rna structural-biology

atom-mapping free-energy-calculations hybrid-topology openfe python

binary-analysis blockchain emulation ethereum program-analysis python security smt symbolic-execution testing z3

active-learning concurrent-learning python

array cuda gpu gpu-computing multidimensional-arrays pycuda python scientific-computing

einsum linear-algebra numpy python scipy scipy-stats xarray xarray-extension

amd array cuda gpu heterogeneous-parallel-programming multidimensional-arrays nvidia opencl opengl parallel-algorithm parallel-computing performance prefix-sum pyopencl python reduction scientific-computing shared-memory sorting

astronomy astropy astropy-affiliated photometry python source-detection

comparison deep-search deepdiff deephash delta diff difference distance distance-calculation hash hashing nested python reconstruction recursive repetition report-repetition tree

bioinformatics carbohydrates cazy cazy-family cazy-webscraper cazymes database enzymes genbank genomics gtdb protein-sequences protein-structures python scraper

c-plus-plus finite-elements finite-volume geophysics inversion modeling open-source python

histograms matplotlib plotting python visualization

closember dask hacktoberfest python satellite weather xarray

julia pvd pvd-files python series-data timesteps vtk vtu vtu-files

complex-networks cpp dynamic-networks graph-algorithms graph-analysis graph-generation network-analysis parallel-algorithm python

carpentries carpentries-incubator education english geospatial-data helpwanted-list lesson pre-alpha python

astronomy astropy hst jwst python synphot synthetic-photometry

alignment classification clustering curves dimensionality-reduction functional-data-analysis functions machine-learning python python3 registration regression scikits smoothing statistics visualization

awesome earth-engine geographic-information-systems gis google-earth-engine javascript landsat landsat-7 landsat-8 modis python radar raster remote-sensing satellite-imagery sentinel sentinel-1 sentinel-2 spectral-index spectral-indices

awesome awesome-list conformal-prediction datascience deeplearning machine-learning machinelearning probability probability-distribution probability-distributions python r uncertainty uncertainty-estimation uncertainty-quantification

ai artificial-intelligence embeddings information-retrieval language-model large-language-models llm machine-learning nlp python rag retrieval-augmented-generation search search-engine semantic-search sentence-embeddings transformers txtai vector-database vector-search

multiprocessing-library python

nemo-ocean python xarray xgcm

avalanche fracture mechanics python snow

cpp hacktoberfest image-analysis insight-toolkit itk medical-imaging numfocus open-science open-source python reproducible-research scientific-computing

astronomy python

machine-learning mooc python scikit-learn

nv-centers physics python quantum-computing scanning-probe-microscopy time-series-analysis

deep-learning python pytorch torchmanager

clustering datamade de-duplicating dedupe dedupe-library entity-resolution python python-library record-linkage

cheminformatics chemistry pubchem python

export geometry geometry-library geometry-processing georeferenced-data georeferencing geospatial geospatial-data import obj off ply python stl

nengo neural-networks neuroscience python

python

angular-spectrum-method diffraction diffraction-pattern diffraction-simulations holography optics physics physics-simulations python wave-optics

dicom pydicom python

histogram python scikit-hep

bioinformatics charting dash data-science data-visualization finance flask gui-framework jupyter modeling plotly plotly-dash productivity python react rstats technical-computing web-app

covariance-model geospatial geostatistics kriging python science spatio-temporal srf statistics variogram variogram-estimation

data data-analysis data-science data-wrangling hugging-face image-data machine-learning nlp numpy pandas polars python scikit-learn

astronomy c drizzle python

bioinformatics python

beta carpentry-lesson intermediate lesson python software-design software-development software-engineering-research training training-materials

cell-classification cell-segmentation computational-pathology deep-learning digital-pathology histopathology image-analysis machine-learning medical-image-analysis python stain-normalization tissue-analysis tissue-segmentation whole-slide-imaging

data-visualization machine-learning materials-informatics materials-science matplotlib plotly plots python uncertainty uncertainty-calibration

python release semantic-version semantic-versioning semver semver-cli semver-format semver-release semver-tag version versioning versions

apple directx game-development gamedev graphics metal modular mojo opengl python vulkan

data-science hacktoberfest hypothesis-testing independence ksample-testing python

astronomy data-format deshima measurement-set python spectroscopy submillimeter

demand-flexibility energy energy-model energy-system-model energy-transition great-britain modelling open-source optimization power-systems pypsa python sector-coupling snakemake-workflow

color-scheme dracula gruvbox matplotlib matplotlib-style-sheets python solarized

cublas cuda cudnn cupy curand cusolver cusparse cusparselt cutensor gpu nccl numpy nvrtc nvtx python rocm scipy tensor

elo openskill openskill-py pypy python ranking ranking-system rating rating-system

distance-correlation python python2 python3 statistics

conda docker pytest python satay transposon yeast

big-data brain-imaging brainweb data-science dataflow dataflow-programming neuroimaging python workflow-engine

elasticity fem finite-element-analysis finite-element-methods finite-elements gmsh meshes meshio pde-solver python scientific-computing solid-mechanics

jupyter-notebook python scattering

container-diff container-tree docker python singularity trie

Engineering (40%)

datanalytics geostatistics machine-learning python

imagezmq opencv-python python pyzmq raspberry-pi